TcGSA
Time-Course Gene Set Analysis
v0.12.13
·
Jul 22, 2025
·
GPL-2 | file LICENSE
Description
Implementation of Time-course Gene Set Analysis (TcGSA), a method for analyzing longitudinal gene-expression data at the gene set level. Method is detailed in: Hejblum, Skinner & Thiebaut (2015) <doi: 10.1371/journal.pcbi.1004310>.
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CRAN Check Status
2
NOTE
12
OK
Show all 14 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | NOTE |
| r-devel-linux-x86_64-debian-gcc | NOTE |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-macos-arm64 | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (2 non-OK)
NOTE
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Boris P Hejblum <boris.hejblum@u-bordeaux.fr>’
Found the following (possibly) invalid URLs:
URL: https://docs.gsea-msigdb.org/#GSEA/Data_Formats/#gmt-gene-matrix-transposed-file-format-gmt/
From: inst/doc/TcGSA_userguide.html
Message: Invalid URL: '#' not allowed in fragment
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Boris P Hejblum <boris.hejblum@u-bordeaux.fr>’
Found the following (possibly) invalid URLs:
URL: https://docs.gsea-msigdb.org/#GSEA/Data_Formats/#gmt-gene-matrix-transposed-file-format-gmt/
From: inst/doc/TcGSA_userguide.html
Message: Invalid URL: '#' not allowed in fragment
Check History
NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Boris P Hejblum <boris.hejblum@u-bordeaux.fr>’
Found the following (possibly) invalid URLs:
URL: https://docs.gsea-msigdb.org/#GSEA/Data_Formats/#gmt-gene-matrix-transposed-file-format-gmt/
From: inst/doc/TcGSA_userguide.html
Message: Invalid URL: '#' not allowed in fragment
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Boris P Hejblum <boris.hejblum@u-bordeaux.fr>’
Found the following (possibly) invalid URLs:
URL: https://docs.gsea-msigdb.org/#GSEA/Data_Formats/#gmt-gene-matrix-transposed-file-format-gmt/
From: inst/doc/TcGSA_userguide.html
Message: Invalid URL: '#' not allowed in fragment
Dependency Network
Version History
new
0.12.13
Mar 10, 2026
new
0.9.8
Apr 27, 2014