R Observatory: Metrics for TAF version 4.3.1

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

TAF

4.3.1

Transparent Assessment Framework for Reproducible Research

1packages depend

10.4Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Arni MagnussonFirst published 2021-04-075 releasesCRAN page ↗GitHub ↗

General framework to organize data, methods, and results used in reproducible scientific analyses. A TAF analysis consists of four scripts (data.R, model.R, output.R, report.R) that are run sequentially. Each script starts by reading files from a previous step and ends with writing out files for the next step. Convenience functions are provided to version control the required data and software, run analyses, clean residues from previous runs, manage files, manipulate tables, and produce figures. With a focus on stability and reproducible analyses, the TAF package comes with no dependencies. TAF forms a base layer for the 'icesTAF' package and other scientific applications.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("TAF", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("ices-tools-prod/TAF")

Development version from ices-tools-prod/TAF. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-taf

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-TAF

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-TAF

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 1.7 min · r-oldrel-windows-x86_64

Code health

Yes

Tests · ratio 0.38

not tracked

Coverage

100%

Documentation · exports

6

Dependencies · direct

Check history

OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMENoVignettesNopkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 34%
Documented parameters: 97%
Return-value docs: 96%
References docs: 1%

Downloads

10.4K

CRAN downloads in the past year

Rank #7,796 · ~29/day · ~870/mo

Releases R versions

Daily download trend is not available in this view yet.

26030 days

1.1K90 days

10.4K1 year

Compare downloads with other packages →

Also on142 r2u20 autocran18 c2d4u

Repository

GitHub ↗ ices-tools-prod/taf

4Stars

3Forks

3Open issues

1Open PRs

33Releases

1,035Commits

8Contributors

License GPL-3.0 · 1,035 commits · Last activity 2026-08-17 · +33.3% stars, 30d

Stars over time

2023-10-18 · 32026-08-20 · 4

Repository practices

Upstream repositoryBeta

Checks run against github.com/ices-tools-prod/taf on 2026-08-16.

No development-tooling practices detected in the upstream repository.

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

0 external dependencies (excludes base and recommended)

Depends (0)

none

Imports (6)

grDeviceslatticemethodsstatstoolsutils

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

1direct

0indirect

icesTAF

Code & Tests

Datasets

People & History

People (6)

Maintainer (1)

Arni Magnusson

Author, Maintainer

Authors (3)

Arni Magnusson

Author, Maintainer

Colin Millar

Author

Iago Mosqueira

Author

Contributors (3)

Alexandros Kokkalis

Contributor

Hjalte Parner

Contributor

Ibrahim Umar

Contributor

Package Timeline

5 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
4.3.1Latest
2025-09-18 · current release · diff ↗
4.3.0
2025-09-02 · diff ↗
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
4.2.0
2023-03-21 · diff ↗
4.1.0
2023-01-23 · diff ↗
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
4.0.0
2021-04-07
R
R 4.0.0 released · 2020-04-24

Package metadata

First published: 2021-04-07
Total releases: 5 / 5 yrs
License: GPL-3 OSI
Bundled data: 2.3 KB / 6 files
Download size: 147 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Appears in task views

Reproducible Research

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("TAF")

Format

Magnusson, A., Kokkalis, A., Millar, C., Mosqueira, I., Parner, H., & Umar, I. (2025). TAF: Transparent Assessment Framework for Reproducible Research (Version 4.3.1) [Computer software]. https://doi.org/10.32614/CRAN.package.TAF

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for TAF version 4.3.1 [Data set]. HJJB, LLC. Data release v2026-08-22. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-22, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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