R Observatory: Metrics for SpatialEpiApp version 0.3

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

This package was removed from CRAN on 2021-11-13. Its history is shown below.

Reason: email to the maintainer is undeliverable

Details below reflect version 0.3, its last release before removal.

SpatialEpiApp

0.3Package record

A Shiny Web Application for the Analysis of Spatial and Spatio-Temporal Disease Data

0packages depend

–downloads / year

–test coverage

–flavors OK

Overview

About

Maintained by Paula MoragaCRAN page ↗GitHub ↗

Runs a Shiny web application that allows to visualize spatial and spatio-temporal disease data, estimate disease risk and detect clusters. The application allows to fit Bayesian disease models to obtain risk estimates and their uncertainty by using the 'R-INLA' package, http://www.r-inla.org, and to detect clusters by using the scan statistics implemented in 'SaTScan', https://www.satscan.org. The application allows user interaction and creates interactive visualizations such as maps supporting padding and zooming and tables that allow for filtering. It also enables the generation of reports containing the analyses performed.

Install

R (source archive)pak (dev)

url <- "https://cran.r-project.org/src/contrib/Archive/SpatialEpiApp/SpatialEpiApp_0.3.tar.gz"
pkgFile <- "SpatialEpiApp_0.3.tar.gz"
download.file(url, pkgFile)
install.packages(pkgFile, type = "source", repos = NULL)

This package is no longer on CRAN, so install.packages() cannot fetch it by name. This downloads the last archived source (0.3) and builds it locally. Install its dependencies first, and note that building from source needs the usual compiler toolchain.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("Paula-Moraga/SpatialEpiApp")

Development version from Paula-Moraga/SpatialEpiApp. Installs pak first if it is not already available.

Health

CRAN checks

CRAN check results are not tracked yet.

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 0.3

READMENoVignettesYes · 1 · staticNEWSNoCitation fileNoWebsitenot declared in DESCRIPTION

Help pages: 2includes a package overview page
Examples that run: no examples
Exported functions with examples: 0%
Documented parameters: not tracked
Return-value docs: 0%
Help pages citing references: 0%

How these are measured

Downloads

SpatialEpiApp Releases R versions

Daily download trend is not available in this view yet.

Compare downloads with other packages →

How downloads are counted

Dependencies

Declared dependencies

19 external dependencies (excludes base and recommended)

Depends (0)

none

Imports (17)

dplyr dygraphs ggplot2 htmlwidgets knitr leaflet mapproj maptools RColorBrewer rgdal rgeos rmarkdown shiny shinyjs SpatialEpi spdep xts

LinkingTo (0)

none

Suggests (2)

INLA R.rsp

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

–indirect (not tracked)

Nothing depends on this yet.

How these are counted

Code & Tests

People & History

People (1)

Paula Moraga

Author, Maintainer since 0.1 (2017)

Releases (3)

Pick two releases to compare their code metrics.

R
R 4.2.0 released · 2022-04-22
archivedRemoved from CRAN
2021-11-13
email to the maintainer is undeliverable
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
R
R 3.6.0 released · 2019-04-26
R
R 3.5.0 released · 2018-04-23
0.3
record
2017-08-28 · diff ↗
0.2
record
2017-06-02 · diff ↗
R
R 3.4.0 released · 2017-04-21
0.1
record
2017-02-27
R
R 3.3.0 released · 2016-05-03

Package metadata

First published: 2017-02-27
Total releases: 3 / 9 yrs
License: GPL-3 OSI
Additional repositories: inla.r-inla-download.org

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("SpatialEpiApp")

Format

Moraga, P. (n.d.). SpatialEpiApp: A Shiny Web Application for the Analysis of Spatial and Spatio-Temporal Disease Data (Version 0.3) [Computer software]. Retrieved October 23, 2026, from https://CRAN.R-project.org/package=SpatialEpiApp

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for SpatialEpiApp version 0.3 [Data set]. HJJB, LLC. Data release v2026-10-22. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-22, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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