R Observatory: Metrics for RRPP version 2.2.0

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

RRPP

2.2.0

Linear Model Evaluation with Randomized Residuals in a Permutation Procedure

1packages depend

20.5Kdownloads / year

37.5%test coverage

13/13checks pass

Overview

About

Maintained by Michael CollyerFirst published 2018-01-2232 releasesCRAN page ↗GitHub ↗

Linear model calculations are made for many random versions of data. Using residual randomization in a permutation procedure, sums of squares are calculated over many permutations to generate empirical probability distributions for evaluating model effects. Additionally, coefficients, statistics, fitted values, and residuals generated over many permutations can be used for various procedures including pairwise tests, prediction, classification, and model comparison. This package should provide most tools one could need for the analysis of high-dimensional data, especially in ecology and evolutionary biology, but certainly other fields, as well.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("RRPP", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("mlcollyer/RRPP")

Development version from mlcollyer/RRPP. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-rrpp

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-RRPP

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-RRPP

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 7.6 min · r-oldrel-windows-x86_64

Code health

Yes

Tests · ratio 0.07

37.5%

Coverage · measured lines

100%

Documentation · exports

5

Dependencies · direct

Check history

OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 103 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 46%
Documented parameters: 100%
Return-value docs: 31%
References docs: 29%

Downloads

20.5K

CRAN downloads in the past year

Rank #2,758 · ~56/day · ~1.7K/mo

Releases R versions

Daily download trend is not available in this view yet.

1.8K30 days

6K90 days

20.5K1 year

Compare downloads with other packages →

Also on209 r2u89 c2d4u

Repository

GitHub ↗ mlcollyer/rrpp

4Stars

1Forks

2Open issues

0Open PRs

23Releases

531Commits

1Contributors

531 commits · Last activity 2026-07-21

Releases over time

2026-07-14 · 222026-07-22 · 23

Repository practices

Upstream repositoryBeta

2 development-tooling and community-health practices detected across 2 families in the upstream repository

Checks run against github.com/mlcollyer/rrpp on 2026-08-09.

CRAN release process (1)

cran-comments.md

Lint, format, editor (1)

RStudio project

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

8 external dependencies (excludes base and recommended)

Depends (1)

R >= 4.4.0

Imports (5)

parallelape ggplot2Matrixlme4

LinkingTo (0)

none

Suggests (5)

knitr rmarkdown testthat dplyr tibble

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

1direct

4indirect

geomorph

Code & Tests

Datasets

People & History

People (2)

Maintainer (1)

Michael Collyer

Author, Maintainer

Authors (2)

Michael Collyer

Author, Maintainer

Dean Adams

Author

Package Timeline

32 releases. Pick two to compare their code metrics. R releases are shown for context.

2.2.0Latest
2026-07-03 · current release · diff ↗
R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
2.1.2
2025-02-19 · diff ↗
2.1.1
2025-02-09 · diff ↗
2.1.0
2025-02-01 · diff ↗
2.0.4
2024-11-14 · diff ↗
2.0.3
2024-06-22 · diff ↗
2.0.2
2024-06-12 · diff ↗
2.0.1
2024-06-04 · diff ↗
R
R 4.4.0 released · 2024-04-24
2.0.0
2024-02-06 · diff ↗
1.4.0
2023-08-15 · diff ↗
R
R 4.3.0 released · 2023-04-21
1.3.1
2022-09-12 · diff ↗
1.3.0
2022-06-21 · diff ↗

Show 26 earlier events

R
R 4.2.0 released · 2022-04-22
1.2.3
2022-03-19 · diff ↗
1.2.2
2022-03-10 · diff ↗
1.2.1
2022-03-01 · diff ↗
1.1.2
2021-11-04 · diff ↗
1.1.1
2021-10-24 · diff ↗
1.1.0
2021-10-09 · diff ↗
R
R 4.1.0 released · 2021-05-18
1.0.0
2021-03-30 · diff ↗
0.6.2
2021-01-11 · diff ↗
0.6.1
2020-06-24 · diff ↗
0.6.0
2020-05-28 · diff ↗
R
R 4.0.0 released · 2020-04-24
0.5.2
2020-01-26 · diff ↗
0.5.1
2020-01-19 · diff ↗
0.5.0
2019-12-19 · diff ↗
0.4.3
2019-10-07 · diff ↗
0.4.2
2019-05-19 · diff ↗
R
R 3.6.0 released · 2019-04-26
0.4.1
2019-04-02 · diff ↗
0.4.0
2019-03-24 · diff ↗
0.3.0
2018-07-23 · diff ↗
R
R 3.5.0 released · 2018-04-23
0.2.0
2018-04-22 · diff ↗
0.1.0
2018-01-22
R
R 3.4.0 released · 2017-04-21

Package metadata

First published: 2018-01-22
Total releases: 32 / 8 yrs
License: GPL (>= 3) OSI
Minimum R: ≥ 4.4.0
Bundled data: 544 KB / 14 files
Download size: 1.0 MB
Installed size: not tracked yet
With dependencies: not tracked yet

Appears in task views

Phylogenetics

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("RRPP")

Format

Collyer, M., & Adams, D. (2026). RRPP: Linear Model Evaluation with Randomized Residuals in a Permutation Procedure (Version 2.2.0) [Computer software]. https://doi.org/10.32614/CRAN.package.RRPP

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for RRPP version 2.2.0 [Data set]. HJJB, LLC. Data release v2026-08-15. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-15, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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