R Observatory: Metrics for RDML7 version 1.0.2

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

RDML7

1.0.2Package record

Read, Write, Validate, and Analyze Real-Time PCR Data in the 'RDML' Format

0packages depend

10downloads / year

57.9%test coverage

5/8flavors OK

Overview

About

Maintained by Konstantin A. BlagodatskikhCRAN page ↗GitHub ↗Issues ↗

Reads, writes, validates, converts, and manipulates quantitative polymerase chain reaction (qPCR) data through the Real-Time PCR Data Markup Language ('RDML') application programming interface (API), using 'S7' objects. Includes an extensible file-format registry, vendor and tabular-data importers, 'RDES' import and export, fluorescence-table helpers, semantic validation, and compatibility wrappers for the historical 'RDML' API.

Install

R (CRAN)pak (dev)Fedora (COPR)

install.packages("RDML7", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("kablag/RDML7")

Development version from kablag/RDML7. Installs pak first if it is not already available.

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-RDML7

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

Health

CRAN checks

3WARNING5OK

Check messages

WARNINGreplacement functionsr-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Error in get(f, envir = code_env) : invalid first argument
Calls: <Anonymous> -> Filter -> unlist -> lapply -> FUN -> get
Execution halted
The argument of a replacement function which corresponds to the right
hand side must be named ‘value’.

r-oldrel-windows-x86_64

Error in get(f, envir = code_env) : invalid first argument
Calls: <Anonymous> -> Filter -> unlist -> lapply -> FUN -> get
Execution halted
The argument of a replacement function which corresponds to the right
hand side must be named 'value'.

CRAN check page ↗

Slowest check: 7.2 min · r-release-macos-x86_64

Status changes

WARNING5 OK, 3 WARNINGNow
WARNING4 OK, 2 WARNING2026-10-23

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 1.0.2

READMEYes · 124 wordsVignettesYes · 6 · dynamicNEWSNoCitation fileYes · cites a publicationWebsitenot declared in DESCRIPTION

Help pages: 77 (1 internal)includes a package overview page
Examples that run: 100%17 run in a plain check
Exported functions with examples: 23%
Documented parameters: 99%
Return-value docs: 100%
Help pages citing references: 0%

Vignettes (6)

How these are measured

Downloads

10

CRAN downloads in the past year

Rank #25,725 · ~0/day · ~1/mo

RDML7 Releases R versions

Daily download trend is not available in this view yet.

1030 days

1090 days

101 year

Compare downloads with other packages →

How downloads are counted

Repository

kablag/rdml7 ↗Account: kablag

0Stars

0Forks

0Open issues

0Open PRs

0Releases

Last activity 2026-10-14

Responsiveness

not measured

How these are measured

PracticesBeta

Repository github.com/kablag/rdml7 is linked, but repository-practices checks have not run for it yet.

How this is detected·Detection ruleset v4 (2026-10-20)

Dependencies

Declared dependencies

21 external dependencies (excludes base and recommended)

Installing RDML7 adds 29 packages (16 with compiled code, 25 MB of source tarballs). Heaviest: stringi 11 MB, data.table 5.7 MB, readxl 2.1 MB.

Depends (1)

R >= 4.1.0

Imports (8)

S7 checkmate data.table readxl stringrtoolsxml2 lubridate

LinkingTo (0)

none

Suggests (14)

knitr chipPCR reshape2 qpcR ggplot2 htmltools DT MBmca PCRedux shiny shinythemes testthat rmarkdown plotly

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

Datasets

People & History

People (4)

Konstantin A. Blagodatskikh

Maintainer since 1.0.2 (2026), Author

Michal Burdukiewicz

Contributor

Stefan Roediger

Contributor

Andrej-Nikolai Spiess

Contributor

Releases (1)

1.0.2Latest
record
2026-10-22 · current release ·
8 days in CRAN's queue
Listed in CRAN's incoming queue from 2026-10-14 15:39 to 2026-10-22 12:59 UTC, in 48 readings.
R
R 4.6.0 released · 2026-04-24

Across CRAN, the median accepted release of the past year spent 26 hours in the queue, 90% under 11 days.How queue time is measured

Package metadata

First published: 2026-10-22
Total releases: 1 / 1 yrs
License: MIT + file LICENSE OSI
Minimum R: ≥ 4.1.0
Download size: 1.6 MB

Cite

Cite this package

Run in R for the authors' entry:

citation("RDML7")

The package provides a citation file, so citation() returns the authors' own entry.

It points to 10.1093/bioinformatics/btx528.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for RDML7 version 1.0.2 [Data set]. HJJB, LLC. Data release v2026-10-24. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-24, which the citation names so these numbers can be found later. More on citing and the projects behind them.

Report a problem with this page →