R Observatory: Metrics for PupillometryR version 0.0.7

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

PupillometryR

0.0.7Package record

A Unified Pipeline for Pupillometry Data

1packages dependsuggested by 2

7.9Kdownloads / year

–test coverage

11/13flavors OK

Overview

About

Maintained by Samuel ForbesCRAN page ↗GitHub ↗Issues ↗

Provides a unified pipeline to clean, prepare, plot, and run basic analyses on pupillometry experiments.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("PupillometryR", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("samhforbes/PupillometryR")

Development version from samhforbes/PupillometryR. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-pupillometryr

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-PupillometryR

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-PupillometryR

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

2NOTE11OK

Check messages

NOTEdependencies in R coder-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Namespace in Imports field not imported from:
  ‘mgcv’
All declared Imports should be used.

CRAN check page ↗

Slowest check: 4.1 min · r-oldrel-windows-x86_64

Status changes

NOTE11 OK, 2 NOTE2026-09-08
ERROR11 OK, 1 NOTE, 1 ERROR2026-09-07
NOTE11 OK, 2 NOTE2026-06-09
ERROR10 OK, 2 NOTE, 1 ERROR2026-06-08
NOTE12 OK, 2 NOTE2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 0.0.7

READMEYes · 451 wordsVignettesYes · 1 · dynamicNEWSYes · 100% structured · does not mention 0.0.7Citation fileYes · cites a publication

Cites a JOSS paper

Help pages: 28
Examples that run: 96%23 run in a plain check · 1 never run
Exported functions with examples: 100%
Documented parameters: 100%
Return-value docs: 95%
Help pages citing references: 0%

Vignettes (1)

PupillometryR HTML

How these are measured

Downloads

7.9K

CRAN downloads in the past year

Rank #4,840 · ~22/day · ~656/mo

Releases R versions

Daily download trend is not available in this view yet.

63630 days

1.7K90 days

7.9K1 year

Compare downloads with other packages →

Also on140 r2u6 autocran

How downloads are counted

Repository

samhforbes/pupillometryr ↗Account: samhforbes

48Stars

5Forks

5Open issues

1Open PRs

4Releases

150Commits

4Commit identities

150 commits · Last activity 2025-12-15 · 0% stars, 30d

Responsiveness

How these are sampled

PRs merged (all time): 100%
Median days to close, 50 most recently updated closed issues: 7
Median days to close, 50 most recently updated closed PRs: 45

Stars over time

2025-08-26 · 452026-07-08 · 48

How these are measured

PracticesBeta

6 development-tooling and community-health practices detected across 4 families in the upstream repository

Checks run against github.com/samhforbes/pupillometryr on 2026-10-21.

Continuous integration (1)

Travis CI (config file)

Docs source (3)

README.Rmdpkgdown

GitHub Pages site last deployed 2025-12-15

Lint, format, editor (1)

RStudio project

Git structural (1)

.gitattributes

How this is detected·Detection ruleset v4 (2026-10-20)

Dependencies

Declared dependencies

10 external dependencies (excludes base and recommended)

Installing PupillometryR adds 51 packages (33 with compiled code, 50 MB of source tarballs). Heaviest: stringi 11 MB, ggplot2 6.0 MB, fds 3.7 MB.

Depends (4)

R >= 3.5.0dplyr ggplot2 rlang

Imports (8)

fdamgcvsignalstatsstringr tidyrutilszoo

LinkingTo (0)

none

Suggests (2)

knitr rmarkdown

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

1direct

0indirect

Imports 1

Suggested by 2

Depends, Imports or LinkingTo, most downloaded first

expowo

Suggests, most downloaded first

eyeprocess gpbiometrics

How these are counted

Code & Tests

Datasets

People & History

People (2)

Samuel Forbes

Author, Maintainer since 0.0.1 (2020)

David Robinson

Contributor

Releases (7)

Pick two releases to compare their code metrics.

R
R 4.6.0 released · 2026-04-24
unarchivedReturned to CRAN
2025-12-19
0.0.7Latest
record
2025-12-19 · current release · diff ↗
archivedRemoved from CRAN
2025-12-18
issues were not corrected in time
0.0.6
record
2025-11-10 · diff ↗
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
0.0.5
record
2023-09-15 · diff ↗ ·
added 3 exports
detect_blinks_by_column, detect_blinks_by_size, detect_blinks_by_velocity
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
0.0.4
record
2021-09-19 · diff ↗
R
R 4.1.0 released · 2021-05-18
unarchivedReturned to CRAN
2020-06-13
0.0.3
record
2020-06-13 · diff ↗
archivedRemoved from CRAN
2020-06-09
required archived package 'fractal'
0.0.2
record
2020-05-15 · diff ↗

Show 3 earlier eventsHide 3 earlier events

R
R 4.0.0 released · 2020-04-24
0.0.1
record
2020-02-02
R
R 3.6.0 released · 2019-04-26

Package metadata

First published: 2020-02-02
Total releases: 7 / 6 yrs
License: MIT + file LICENSE OSI
Minimum R: ≥ 3.5.0
Bundled data: 194 KB / 1 file
Download size: 638 KB

Cite

Cite this package

Run in R for the authors' entry:

citation("PupillometryR")

The package provides a citation file, so citation() returns the authors' own entry.

It points to 10.21105/joss.02285.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for PupillometryR version 0.0.7 [Data set]. HJJB, LLC. Data release v2026-10-23. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-23, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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