R Observatory: Metrics for MSEtool version 3.7.5

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

MSEtool

3.7.5

Management Strategy Evaluation Toolkit

4packages depend

10.1Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Adrian HordykFirst published 2018-08-1731 releasesCRAN page ↗GitHub ↗

Development, simulation testing, and implementation of management procedures for fisheries (see Carruthers & Hordyk (2018) doi:10.1111/2041-210X.13081).

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("MSEtool", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("Blue-Matter/MSEtool")

Development version from Blue-Matter/MSEtool. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-msetool

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-MSEtool

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-MSEtool

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 8.5 min · r-oldrel-windows-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

11

Dependencies · direct

Check history

OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-04-25
12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-04-22
11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-04-18
10 OK · 3 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE

Show 1 earlier snapshots

NOTE2026-03-10
11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 101 wordsVignettesNopkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 47%
Documented parameters: 99%
Return-value docs: 53%
References docs: 3%

Downloads

10.1K

CRAN downloads in the past year

Rank #5,805 · ~28/day · ~846/mo

Releases R versions

Daily download trend is not available in this view yet.

35930 days

1.4K90 days

10.1K1 year

Compare downloads with other packages →

Also on682 r2u23 autocran

Repository

GitHub ↗ blue-matter/msetool

10Stars

3Forks

53Open issues

0Open PRs

10Releases

2,214Commits

4Contributors

License GPL-3.0 · 2,214 commits · Last activity 2026-08-20

Commits over time

2026-07-19 · 2,0222026-08-09 · 2,156

Repository practices

Upstream repositoryBeta

5 development-tooling and community-health practices detected across 5 families in the upstream repository

Checks run against github.com/blue-matter/msetool on 2026-08-23.

Continuous integration (1)

GitHub Actions

Reproducibility and dev environment (1)

data-raw/

CRAN release process (1)

cran-comments.md

Lint, format, editor (1)

RStudio project

Show all practices

Coverage (1)

Codecov

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

31 external dependencies (excludes base and recommended)

Depends (2)

R >= 4.1.0snowfall

Imports (10)

abind cli dplyrmethodsgrDevicesggplot2parallelRcppstatsutils

LinkingTo (2)

Rcpp RcppArmadillo

Suggests (25)

bootbroom covr crayon DT fmsb kableExtra knitr ggrepel gridExtraMASSmvtnorm openxlsx pak pbapply r4ss readxl reshape2 rfishbase rmarkdown shiny testthat tidyr TMB usethis

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

4direct

0indirect

DLMtool SAMtool openMSE Slick

Code & Tests

Datasets

People & History

People (4)

Maintainer (1)

Adrian Hordyk

Author, Maintainer

Authors (3)

Adrian Hordyk

Author, Maintainer

Tom Carruthers

Author

Quang Huynh

Author

Contributors (1)

Chris Grandin

Contributor

Package Timeline

31 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
3.7.5Latest
2025-09-30 · current release · diff ↗
3.7.4
2025-06-04 · diff ↗
R
R 4.5.0 released · 2025-04-11
3.7.3
2024-11-22 · diff ↗
3.7.2
2024-09-23 · diff ↗
R
R 4.4.0 released · 2024-04-24
3.7.1
2024-02-06 · diff ↗
3.7.0
2023-07-20 · diff ↗
R
R 4.3.0 released · 2023-04-21
3.6.2
2023-03-28 · diff ↗
3.6.1
2023-01-05 · diff ↗
3.6.0
2022-10-19 · diff ↗
3.5.0
2022-06-07 · diff ↗
R
R 4.2.0 released · 2022-04-22
3.4.0
2022-01-05 · diff ↗

Show 26 earlier events

3.3.0
2021-11-16 · diff ↗
3.2.0
2021-08-13 · diff ↗
3.1.1
2021-07-08 · diff ↗
3.1.0
2021-07-03 · diff ↗
R
R 4.1.0 released · 2021-05-18
3.0.2
2021-03-10 · diff ↗
3.0.1
2021-02-02 · diff ↗
3.0.0
2021-01-09 · diff ↗
2.0.1
2020-09-29 · diff ↗
2.0.0
2020-08-06 · diff ↗
1.7.0
2020-06-24 · diff ↗
1.6.0
2020-05-05 · diff ↗
R
R 4.0.0 released · 2020-04-24
1.5.0
2020-03-24 · diff ↗
1.4.3
2020-01-10 · diff ↗
1.4.1
2019-12-03 · diff ↗
1.4.0
2019-12-01 · diff ↗
1.3.0
2019-10-01 · diff ↗
1.2.1
2019-07-30 · diff ↗
unarchivedReturned to CRAN
2019-07-30
archivedRemoved from CRAN
2019-07-20
installation errors were not corrected in time
1.2.0
2019-06-17 · diff ↗
R
R 3.6.0 released · 2019-04-26
1.1.0
2018-10-17 · diff ↗
1.0.0
2018-08-17
R
R 3.5.0 released · 2018-04-23

Package metadata

First published: 2018-08-17
Total releases: 31 / 8 yrs
License: GPL-3 OSI
Minimum R: ≥ 4.1.0
Bundled data: 2.9 MB / 58 files
Download size: 3.5 MB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("MSEtool")

Format

Hordyk, A., Carruthers, T., Grandin, C., & Huynh, Q. (2025). MSEtool: Management Strategy Evaluation Toolkit (Version 3.7.5) [Computer software]. https://doi.org/10.32614/CRAN.package.MSEtool

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for MSEtool version 3.7.5 [Data set]. HJJB, LLC. Data release v2026-08-23. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-23, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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