R Observatory: Metrics for DLMtool version 6.0.7

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

DLMtool needs MSEtool, which CRAN will archive unless its check problems are fixed by Nov 9.

DLMtool

6.0.7Package record

Data-Limited Methods Toolkit

1packages depend

6.2Kdownloads / year

0.0%test coverage

13/13flavors OK

Overview

About

Maintained by Adrian HordykCRAN page ↗

A collection of data-limited management procedures that can be evaluated with management strategy evaluation with the 'MSEtool' package, or applied to fishery data to provide management recommendations.

Changes in 6.0.7

patch to fix issues with NEWS.md
removed LBSPR MP due to issues with compiling the C+ code

From NEWS.md in the release

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("DLMtool", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-dlmtool

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-DLMtool

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-DLMtool

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 4.4 min · r-devel-windows-x86_64

Status changes

OK13 OK2026-08-05
NOTE12 OK, 1 NOTE2026-08-01
OK14 OK2026-04-22
ERROR13 OK, 1 ERROR2026-04-18
OK14 OK2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 6.0.7

READMEYes · 91 wordsVignettesNoNEWSYes · 100% structured · mentions 6.0.7Citation fileNoWebsitenot declared in DESCRIPTION

Help pages: 63 (19 internal)includes a package overview page
Examples that run: 98%44 run in a plain check · 1 never run
Exported functions with examples: 73%
Documented parameters: 100%
Return-value docs: 79%
Help pages citing references: 49%

How these are measured

Downloads

6.2K

CRAN downloads in the past year

Rank #4,624 · ~17/day · ~513/mo

Releases R versions

Daily download trend is not available in this view yet.

84430 days

1.8K90 days

6.2K1 year

Compare downloads with other packages →

Also on392 r2u10 autocran

How downloads are counted

Dependencies

Declared dependencies

8 external dependencies (excludes base and recommended)

Installing DLMtool adds 31 packages (15 with compiled code, 23 MB of source tarballs). Heaviest: ggplot2 6.0 MB, MSEtool 3.5 MB, Rcpp 1.8 MB.

Depends (2)

R >= 3.5.0MSEtool

Imports (6)

dplyr ggplot2graphicsmethodsRcppstats

LinkingTo (1)

Rcpp

Suggests (3)

gridExtra mvtnorm testthat

Enhances (0)

none

Dependencies facing archival

CRAN will archive these unless their check problems are fixed by the date shown. This package needs each one to install.

MSEtoolfix by Nov 9

Dependency license breakdown →

Reverse dependencies

1direct

0indirect

Depends 1

Depends, Imports or LinkingTo, most downloaded first

openMSE

How these are counted

Code & Tests

People & History

People (9)

Adrian Hordyk

Author, Maintainer since 6.0.0 (2021) · added in 3.1

Tom Carruthers

Author

Quang Huynh

Author · added in 6.0.0

M. Bryan

Contributor · added in 5.1.2

HF. Geremont

Contributor · added in 5.1.2

C. Grandin

Contributor · added in 5.1.2

W. Harford

Contributor · added in 5.1.2

Q. Huynh

Contributor · added in 5.1.2

C. Walters

Contributor · added in 5.1.2

Previously maintained by Tom Carruthers (1.34 to 5.4.5).

Releases (42)

Pick two releases to compare their code metrics.

R
R 4.6.0 released · 2026-04-24
6.0.7Latest
record
2026-02-05 · current release · diff ↗ ·
removed 4 exports
FilterSmooth, LBSPR, LBSPR_, LBSPR_MLL
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
6.0.6
record
2022-06-20 · diff ↗
6.0.5
record
2022-06-08 · diff ↗
6.0.4
record
2022-04-28 · diff ↗ ·
removed 1 export
LBSPRgen
R
R 4.2.0 released · 2022-04-22
6.0.3
record
2021-08-12 · diff ↗
6.0.2
record
2021-07-03 · diff ↗
R
R 4.1.0 released · 2021-05-18
6.0.1
record
2021-04-01 · diff ↗
6.0.0
record
2021-01-13 · diff ↗ ·
removed 175 exports
AAVE, AAVY, BlankSelPlot, CALsimp, COSEWIC_Blow, COSEWIC_Dplot, COSEWIC_Hplot, COSEWIC_Pplot, COSEWIC_report, COSEWIC_tab, COSEWIC_tab_formatted, CSRA, CalcMPDynamics, Can, CanMP, Cant, ChkYrs, ChooseEffort, ChooseM, ChooseSelect, Converge, Cos_thresh_tab, Cplot, DFO_bar, DFO_hist, DFO_plot, DFO_plot2, DFO_proj, DFO_quant, DFO_report and 145 more
5.4.5
record
2020-06-16 · diff ↗
5.4.4
record
2020-06-02 · diff ↗ ·
added 1 export
addMPs

Show 39 earlier eventsHide 39 earlier events

R
R 4.0.0 released · 2020-04-24
5.4.3
record
2020-04-16 · diff ↗
5.4.2
record
2020-03-10 · diff ↗ ·
removed 1 export
ForceCor
5.4.1
record
2019-12-06 · diff ↗
5.4.0
record
2019-09-24 · diff ↗ ·
removed 2 exports
DOM, runMSErobust

added 5 exports
AAVE, CurC, Dom, Report, plotOM
5.3.1
record
2019-04-29 · diff ↗ ·
added 8 exports
CalcMPDynamics, DLMdiag, MSYCalcs, OneRep, genSizeCompWrap, getfifth, optMSY_eq, popdynCPP
R
R 3.6.0 released · 2019-04-26
5.3
record
2019-03-06 · diff ↗ ·
removed 1 export
simYears

added 8 exports
CALsimp, Data2csv, LBSPR_MLL, Lratio_BHI3, PMLimit, PMObj, RealFease, Uses
5.2.3
record
2018-09-11 · diff ↗ ·
added 3 exports
Growth2OM, LW2OM, cheatsheets
5.2.2
record
2018-08-17 · diff ↗
5.2.1
record
2018-07-13 · diff ↗
5.2
record
2018-07-10 · diff ↗ ·
removed 22 exports
COSEWIC_plot, Fease_xl, POF, SRopt, SS2DLM, SS2Data, fetch.file.names, getBH, getGpars, iSCAM2DLM, iSCAM2Data, iSCAMcomps, iSCAMinds, load.iscam.files, negcorlogspace, optBH, read.control.file, read.data.file, read.mcmc, read.par.file, read.projection.file, read.report.file

added 82 exports
CC, CC2, CC3, CC5, COSEWIC_Blow, COSEWIC_Dplot, COSEWIC_Hplot, COSEWIC_Pplot, COSEWIC_report, COSEWIC_tab, COSEWIC_tab_formatted, CanMP, ChkYrs, CompSRA_, Cos_thresh_tab, DBSRA_, DBSRAopt, DCAC_, DCACs, DD_, DD_R, DFO_bar, DFO_quant, DFO_report, DFO_spider, DFO_tab, DFO_tab_formatted, DLMenv, Fdem_, FilterSmooth and 52 more
R
R 3.5.0 released · 2018-04-23
5.1.3
record
2018-03-27 · diff ↗
5.1.2
record
2018-03-21 · diff ↗
5.1
record
2018-03-18 · diff ↗ ·
removed 49 exports
Blow_opt, CSRAfunc, CalcInput, CalcOutput, CheckConverg, ChkDatNA, ChkObj, DBSRA_ML, DD_R, Jplot, L2A, LBSPR, LBSPR_ItEff, LBSPR_ItSel, LBSPR_ItTAC, MPclass, OM_xl, OneRep, Range, Sam, Splot, condmet, derive_beta_par, dnormal, doprojPI_cpp, genLenComp, getAFC, getBlow, getFMSY3, getFref3 and 19 more

added 9 exports
AvC_MLL, DataInit, Itarget1_MPA, MPtype, XL2Data, applyMP, optCPU, plotMPA, runMP
5.0.2
record
2017-11-26 · diff ↗
5.0.1
record
2017-11-24 · diff ↗
5.0
record
2017-10-24 · diff ↗ ·
removed 20 exports
FMSYopt, GetMoreData, SelectFun, SetRecruitCycle, TwoSidedFun, doprojPI, getFMSY, getFMSY2, getFref, getFref2, getFs, getSlope1, getSlope2, getSlopeFun, getmov, getq, getq2, getroot, optF, qopt

added 19 exports
AAVY, DLMextra, LTY, OMdoc, OMexample, OMinit, P10, P100, P50, POF, PWhisker, STY, Tplot3, XL2OM, Yield, calcMean, calcProb, dnormal, getsel
4.4.1
record
2017-08-03 · diff ↗ ·
added 2 exports
derive_beta_par, sample_steepness2
4.4
record
2017-07-20 · diff ↗ ·
removed 2 exports
ChooseMort, runMSE_old

added 22 exports
CalcInput, CalcOutput, ChooseM, DD_R, LSRA_MCMC_sim, LSRA_opt_cpp, getFMSY3, getFref3, getFs, getq3, optF, optMSY, optQ, plotM, plotSelect, popdyn, popdynCPP, popdynOneTS, popdynOneTScpp, runMSEnomsg, simYears, validcpars
4.3.2
record
2017-07-03 · diff ↗
4.3.1
record
2017-06-30 · diff ↗ ·
added 9 exports
ChooseMort, SampleCpars, SampleFleetPars, SampleImpPars, SampleObsPars, SampleStockPars, hist2, runMSE_old, userguide
4.2
record
2017-06-02 · diff ↗ ·
added 16 exports
ChkDatNA, ChkObj, DFO_plot, Data_xl, GetMoreData, IOTC_plot, MPclass, SS2Data, SubCpars, iSCAM2Data, iSCAMcomps, iSCAMinds, plotFleet, plotImp, plotObs, plotStock
4.1
record
2017-05-02 · diff ↗ ·
added 33 exports
Blow_opt, COSEWIC_plot, DFO_hist, DFO_plot2, DFO_proj, ForceCor, LSRA, LSRA2, LSRA_opt, LinInterp, Replace, SRAcomp, SRAsim, SRopt, SS2DLM, StochasticSRA, SubOM, compplot, cparscheck, fetch.file.names, getBH, getBlow, getGpars, iSCAM2DLM, load.iscam.files, negcorlogspace, optBH, read.control.file, read.data.file, read.mcmc and 3 more
R
R 3.4.0 released · 2017-04-21
3.2.3
record
2017-04-10 · diff ↗ ·
removed 4 exports
DoOpt, KalmanFilter, LBSPRSim, OptFun

added 42 exports
BlankSelPlot, Converge, FMSYopt, OneRep, Pplot2, Range, SelectFun, SketchFun, TACfilter, TwoSidedFun, alphaconv, betaconv, checkMSE, condmet, cv, doprojPI, doprojPI_cpp, genLenComp, getEffhist, getFMSY, getFMSY2, getFref, getFref2, getSlope1, getSlope2, getSlopeFun, getclass, getmov2, getq2, getroot and 12 more
3.2.2
record
2016-12-27 · diff ↗ ·
added 8 exports
Cplot, EtargetLopt, Jplot, L95target, minlenLopt1, MPStats, plotFun, Splot
3.2.1
record
2016-08-11 · diff ↗ ·
added 1 export
updateMSE
3.2
record
2016-06-09 · diff ↗ ·
removed 1 export
EDCAC

added 27 exports
DAAC, DDe, DDes, DDe75, DTe40, DTe50, HDAAC, Input, ITe5, ITe10, joinMSE, makePerf, NFref, runMSErobust, slotlim, VOI2, wormplot, LstepCE1, LstepCE2, LtargetE1, LtargetE4, ItargetE1, ItargetE4, VOIplot, OM_xl, Fease_xl, writeCSV
R
R 3.3.0 released · 2016-05-03
3.1
record
2016-02-27 · diff ↗ ·
removed 1 export
matagelim

added 26 exports
AvC, ChooseEffort, ChooseSelect, DOM, DoOpt, IT5, IT10, ITM, KalmanFilter, L2A, LBSPRSim, LBSPR, LBSPR_ItTAC, LBSPR_ItEff, LBSPR_ItSel, matlenlim, matlenlim2, ML2D, NAor0, NOAA_plot, OptFun, plotOFL, SetRecruitCycle, Sub, runInMP, TradePlot
2.1.1
record
2015-11-03 · diff ↗
2.1
record
2015-11-01 · diff ↗ ·
added 7 exports
EDCAC, Fease, Tplot2, CheckConverg, CSRA, CSRAfunc, getAFC
2.0
record
2015-08-26 · diff ↗ ·
removed 3 exports
area1MPA, getQuota, matsizlim

added 10 exports
CompSRA4010, curE, curE75, matagelim, MCD, MCD4010, MRreal, MRnoreal, TAC, VOI
1.35
record
2015-05-20 · diff ↗ ·
removed 1 export
MMHCR

added 13 exports
CC1, CC4, Fadapt, Islope1, Islope4, Itarget1, Itarget4, LstepCC1, LstepCC4, Ltarget1, Ltarget4, SPmod, SPslope
R
R 3.2.0 released · 2015-04-16
1.34
record
2014-09-14
R
R 3.1.0 released · 2014-04-10

Package metadata

First published: 2014-09-14
Total releases: 42 / 12 yrs
License: GPL-3 OSI
Minimum R: ≥ 3.5.0
Download size: 123 KB

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("DLMtool")

Format

Hordyk, A., Bryan, M., Carruthers, T., Geremont, H., Grandin, C., Harford, W., Huynh, Q., Huynh, Q., & Walters, C. (2026). DLMtool: Data-Limited Methods Toolkit (Version 6.0.7) [Computer software]. https://doi.org/10.32614/CRAN.package.DLMtool

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for DLMtool version 6.0.7 [Data set]. HJJB, LLC. Data release v2026-10-25. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-25, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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