R Observatory: Metrics for MPSEM version 0.6-1

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

MPSEM

0.6-1

Modelling Phylogenetic Signals using Eigenvector Maps

1packages depend

8.5Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Guillaume GuénardFirst published 2013-09-0316 releasesCRAN page ↗

Computational tools to represent phylogenetic signals using adapted eigenvector maps.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("MPSEM", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-mpsem

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-MPSEM

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-MPSEM

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 2.2 min · r-devel-windows-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

3

Dependencies · direct

Check history

OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 203 wordsVignettesYes · dynamicpkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 100%
Return-value docs: 100%
References docs: 100%

Downloads

8.5K

CRAN downloads in the past year

Rank #5,276 · ~23/day · ~711/mo

Releases R versions

Daily download trend is not available in this view yet.

25230 days

1.5K90 days

8.5K1 year

Compare downloads with other packages →

Also on403 r2u17 autocran84 c2d4u

Dependencies

Declared dependencies

5 external dependencies (excludes base and recommended)

Depends (3)

R >= 3.0.0ape magrittr

Imports (1)

MASS

LinkingTo (0)

none

Suggests (3)

knitr caper xfun

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

1direct

0indirect

tapnet

Code & Tests

People & History

People (2)

Maintainer (1)

Guillaume Guénard

Author, Maintainer · added in 0.4-4

Authors (1)

Guillaume Guénard

Author, Maintainer · added in 0.4-4

Contributors (1)

Pierre Legendre

Contributor · added in 0.4-4

Listed in earlier versions (2)

Guillaume Guenard

no longer listed · 3.0.2 to 0.4-1

with contribution from Pierre Legendre

no longer listed · 3.0.2 to 0.4-1

Package Timeline

16 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
0.6-1Latest
2025-05-25 · current release · diff ↗
R
R 4.5.0 released · 2025-04-11
0.5-1
2024-10-23 · diff ↗
0.4-4
2024-09-05 · diff ↗
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
0.4-1
2022-01-13 · diff ↗
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
0.3-6
2019-06-03 · diff ↗
R
R 3.6.0 released · 2019-04-26
0.3-4
2018-05-16 · diff ↗
R
R 3.5.0 released · 2018-04-23
0.3-3
2017-09-25 · diff ↗

Show 14 earlier events

0.3-2
2017-08-22 · diff ↗
R
R 3.4.0 released · 2017-04-21
R
R 3.3.0 released · 2016-05-03
0.3-1
2015-12-17 · diff ↗
R
R 3.2.0 released · 2015-04-16
0.2-6
2014-12-02 · diff ↗
0.2-5
2014-06-20 · diff ↗
R
R 3.1.0 released · 2014-04-10
0.2-3
2014-03-19 · diff ↗
3.0.3
2014-01-15 · diff ↗
0.2-1
2014-01-15 · diff ↗
0.1-2
2013-09-03 · diff ↗
3.0.2
2013-08-29
R
R 3.0.0 released · 2013-04-03

Package metadata

First published: 2013-09-03
Total releases: 16 / 13 yrs
License: GPL-3 OSI
Minimum R: ≥ 3.0.0
Download size: 167 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Appears in task views

Phylogenetics

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("MPSEM")

Format

Guénard, G., & Legendre, P. (2025). MPSEM: Modelling Phylogenetic Signals using Eigenvector Maps (Version 0.6-1) [Computer software]. https://doi.org/10.32614/CRAN.package.MPSEM

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for MPSEM version 0.6-1 [Data set]. HJJB, LLC. Data release v2026-08-18. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-18, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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