R Observatory: Metrics for INLAjoint version 26.6.2

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

INLAjoint

26.6.2

Multivariate Joint Modeling for Longitudinal and Time-to-Event Outcomes with 'INLA'

0packages depend

4.5Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Denis RustandFirst published 2023-10-285 releasesCRAN page ↗GitHub ↗

Estimation of joint models for multivariate longitudinal markers (with various distributions available) and survival outcomes (possibly accounting for competing risks) with Integrated Nested Laplace Approximations (INLA). The flexible and user friendly function joint() facilitates the use of the fast and reliable inference technique implemented in the 'INLA' package for joint modeling. More details are given in the help page of the joint() function (accessible via ?joint in the R console) and the vignette associated to the joint() function (accessible via vignette("INLAjoint") in the R console).

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("INLAjoint", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("DenisRustand/INLAjoint")

Development version from DenisRustand/INLAjoint. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-inlajoint

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-INLAjoint

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-INLAjoint

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 10.5 min · r-release-macos-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

9

Dependencies · direct

Check history

OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-06-03
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-06-02
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-04-25
12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Show 1 earlier snapshots

NOTE2026-03-10
12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 223 wordsVignettesYes · dynamicpkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 0%
Documented parameters: 100%
Return-value docs: 86%
References docs: 3%

Downloads

4.5K

CRAN downloads in the past year

Rank #7,084 · ~12/day · ~371/mo

Releases R versions

Daily download trend is not available in this view yet.

27430 days

1.2K90 days

4.5K1 year

Compare downloads with other packages →

Also on136 r2u21 autocran

Repository

GitHub ↗ denisrustand/inlajoint

23Stars

3Forks

0Open issues

0Open PRs

94Releases

229Commits

5Contributors

229 commits · Last activity 2026-07-27

Releases over time

2026-07-14 · 932026-07-28 · 94

Repository practices

Upstream repositoryBeta

2 development-tooling and community-health practices detected across 2 families in the upstream repository

Checks run against github.com/denisrustand/inlajoint on 2026-08-16.

Research and citation (1)

CITATION.cff

Lint, format, editor (1)

RStudio project

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

14 external dependencies (excludes base and recommended)

Depends (3)

R >= 3.6utilsstats

Imports (7)

numDeriv reformulas ggplot2methodsMatrixnlmedata.table

LinkingTo (0)

none

Suggests (15)

INLA knitr rmarkdownsplinesgraphicsgrDevicesR.rspsurvivalJMbayes2 rstanarm frailtypack smcure fmesherMASSsn

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (4)

Maintainer (1)

Denis Rustand

Maintainer, Author

Authors (4)

Denis Rustand

Maintainer, Author

Haavard Rue

Author

Elias Teixeira Krainski

Author

Janet van Niekerk

Author

Package Timeline

5 releases. Pick two to compare their code metrics. R releases are shown for context.

26.6.2Latest
2026-06-02 · current release · diff ↗
R
R 4.6.0 released · 2026-04-24
25.11.10
2025-11-10 · diff ↗
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
24.3.25
2024-03-25 · diff ↗
24.2.4
2024-02-04 · diff ↗
23.10.28
2023-10-28
R
R 4.3.0 released · 2023-04-21

Package metadata

First published: 2023-10-28
Total releases: 5 / 3 yrs
License: GPL-3 OSI
Additional repositories: inla.r-inla-download.org
Minimum R: ≥ 3.6
Bundled data: 9.8 KB / 4 files
Download size: 652 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("INLAjoint")

The authors publish a CITATION.cff, so they have said how they want this cited. Run citation() and use what it gives you.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for INLAjoint version 26.6.2 [Data set]. HJJB, LLC. Data release v2026-08-22. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-22, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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