R Observatory: Metrics for EcotoneFinder version 0.2.3

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

EcotoneFinder

0.2.3Package record

Characterising and Locating Ecotones and Communities

0packages depend

3.1Kdownloads / year

0.0%test coverage

9/13flavors OK

Overview

About

Maintained by Antoine BagnaroCRAN page ↗

Analytical methods to locate and characterise ecotones, ecosystems and environmental patchiness along ecological gradients. Methods are implemented for isolated sampling or for space/time series. It includes Detrended Correspondence Analysis (Hill & Gauch (1980) doi:10.1007/BF00048870), fuzzy clustering (De Cáceres et al. (2010) doi:10.1080/01621459.1963.10500845), biodiversity indices (Jost (2006) doi:10.1111/j.2006.0030-1299.14714.x), and network analyses (Epskamp et al. (2012) doi:10.18637/jss.v048.i04) - as well as tools to explore the number of clusters in the data. Functions to produce synthetic ecological datasets are also provided.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("EcotoneFinder", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-ecotonefinder

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-EcotoneFinder

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-EcotoneFinder

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

4NOTE9OK

Check messages

NOTECRAN incoming feasibilityr-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Maintainer: ‘Antoine Bagnaro <antoine.bagnaro@wanadoo.fr>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Antoine",
                    family = "Bagnaro",
                    role = c("aut", "cre"),
                    email = "antoine.bagnaro@wanadoo.fr")
as necessary.

NOTEdependencies in R coder-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Namespaces in Imports field not imported from:
  ‘Rmisc’ ‘rlang’
All declared Imports should be used.

CRAN check page ↗

Slowest check: 2.6 min · r-oldrel-windows-x86_64

Status changes

NOTE9 OK, 4 NOTE2026-06-09
ERROR9 OK, 3 NOTE, 1 ERROR2026-06-08
NOTE7 OK, 7 NOTE2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 0.2.3

READMENoVignettesNoNEWSNoCitation fileNoWebsitenot declared in DESCRIPTION

Description cites a JSS article

Help pages: 29
Examples that run: 76%22 run in a plain check · 7 only when donttest examples are enabled (R CMD check --as-cran)
Exported functions with examples: 100%
Documented parameters: 93%
Return-value docs: 100%
Help pages citing references: 0%

How these are measured

Downloads

3.1K

CRAN downloads in the past year

Rank #14,921 · ~8/day · ~255/mo

Releases R versions

Daily download trend is not available in this view yet.

32630 days

79590 days

3.1K1 year

Compare downloads with other packages →

Also on71 r2u4 autocran

How downloads are counted

Dependencies

Declared dependencies

19 external dependencies (excludes base and recommended)

Installing EcotoneFinder adds 84 packages (45 with compiled code, 71 MB of source tarballs). Heaviest: stringi 11 MB, ggplot2 6.0 MB, data.table 5.7 MB.

Depends (1)

R >= 3.5.0

Imports (19)

clustercolorspace corrplot e1071 ggplot2graphicsqgraph igraphmethodsphilentropy plyr purrr reshape rlang Rmiscstatsvegan vegclust withr

LinkingTo (0)

none

Suggests (4)

testthat knitr rmarkdown bookdown

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

People & History

People (from the free-text Author field) (1)

Antoine Bagnaro

Maintainer since 0.2.2 (2020)

Releases (2)

Pick two releases to compare their code metrics.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
0.2.3Latest
record
2021-02-17 · current release · diff ↗
0.2.2
record
2020-11-23
R
R 4.0.0 released · 2020-04-24

Package metadata

First published: 2020-11-23
Total releases: 2 / 6 yrs
License: MIT + file LICENSE OSI
Minimum R: ≥ 3.5.0
Download size: 50 KB

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("EcotoneFinder")

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for EcotoneFinder version 0.2.3 [Data set]. HJJB, LLC. Data release v2026-10-18. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-18, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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