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DDESONN

7.1.11

A Deep Dynamic Experimental Self-Organizing Neural Network Framework

0packages depend
1.3Kdownloads / year
test coverage
13/13checks pass

Overview

About
Maintained by Mathew William Armitage FokFirst published 2026-03-032 releasesCRAN page ↗GitHub ↗

Provides a fully native R deep learning framework for constructing, training, evaluating, and inspecting Deep Dynamic Ensemble Self Organizing Neural Networks at research scale. The core engine is an object oriented R6 class-based implementation with explicit control over layer layout, dimensional flow, forward propagation, back propagation, and transparent optimizer state updates. The framework does not rely on external deep learning back ends, enabling direct inspection of model state, reproducible numerical behavior, and fine grained architectural control without requiring compiled dependencies or graphics processing unit specific run times. Users can define dimension agnostic single layer or deep multi-layer networks without hard coded architecture limits, with per layer configuration vectors for activation functions, derivatives, dropout behavior, and initialization strategies automatically aligned to network depth through controlled replication or truncation. Reproducible workflows can be executed through high level helpers for fit, run, and predict across binary classification, multi-class classification, and regression modes. Training pipelines support optional self organization, adaptive learning rate behavior, and structured ensemble orchestration in which candidate models are evaluated under user specified performance metrics and selectively promoted or pruned to refine a primary ensemble, enabling controlled ensemble evolution over successive runs. Ensemble evaluation includes fused prediction strategies in which member outputs may be combined through weighted averaging, arithmetic averaging, or voting mechanisms to generate consolidated metrics for research level comparison and reproducible per-seed assessment. The framework supports multiple optimization approaches, including stochastic gradient descent, adaptive moment estimation, and look ahead methods, alongside configurable regularization controls such as L1, L2, and mixed penalties with separate weight and bias update logic. Evaluation features provide threshold tuning, relevance scoring, receiver operating characteristic and precision recall curve generation, area under curve computation, regression error diagnostics, and report ready metric outputs. The package also includes artifact path management, debug state utilities, structured run level metadata persistence capturing seeds, configuration states, thresholds, metrics, ensemble transitions, fused evaluation artifacts, and model identifiers, as well as reproducible scripts and vignettes documenting end to end experiments. Kingma and Ba (2015) doi:10.48550/arXiv.1412.6980 "Adam: A Method for Stochastic Optimization". Hinton et al. (2012) https://www.cs.toronto.edu/~tijmen/csc321/slides/lecture_slides_lec6.pdf "Neural Networks for Machine Learning (RMSprop lecture notes)". Duchi et al. (2011) https://jmlr.org/papers/v12/duchi11a.html "Adaptive Subgradient Methods for Online Learning and Stochastic Optimization". Zeiler (2012) doi:10.48550/arXiv.1212.5701 "ADADELTA: An Adaptive Learning Rate Method". Zhang et al. (2019) doi:10.48550/arXiv.1907.08610 "Lookahead Optimizer: k steps forward, 1 step back". You et al. (2019) doi:10.48550/arXiv.1904.00962 "Large Batch Optimization for Deep Learning: Training BERT in 76 minutes (LAMB)". McMahan et al. (2013) https://research.google.com/pubs/archive/41159.pdf "Ad Click Prediction: a View from the Trenches (FTRL-Proximal)". Klambauer et al. (2017) https://proceedings.neurips.cc/paper/6698-self-normalizing-neural-networks.pdf "Self-Normalizing Neural Networks (SELU)". Maas et al. (2013) https://ai.stanford.edu/~amaas/papers/relu_hybrid_icml2013_final.pdf "Rectifier Nonlinearities Improve Neural Network Acoustic Models (Leaky ReLU / rectifiers)".

Install

Health

CRAN checks
13OK
Slowest check: 19.7 min · r-oldrel-windows-x86_64
Code health
None
Tests · ratio 0.00
not tracked
Coverage
100%
Documentation · exports
11
Dependencies · direct
Check history
  • OK2026-08-05
    13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
  • NOTE2026-08-01
    12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
  • OK2026-04-25
    12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
  • NOTE2026-03-10
    11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

Documentation
READMEYes · 7,667 wordsVignettesYes · dynamicpkgdown siteNoNEWSNoCode of conductNoContributing guideNo
Examples that run
88%
Documented parameters
100%
Return-value docs
100%
References docs
0%

Downloads

1.3K
CRAN downloads in the past year
Rank #20,539 · ~4/day · ~112/mo
Daily download trend is not available in this view yet.
15830 days
53990 days
1.3K1 year
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Also on122 r2u20 autocran

Repository

Repository
0Stars
0Forks
0Open issues
0Open PRs
0Releases
Last activity 2026-03-09

Repository practices

Upstream repositoryBeta

1 development-tooling and community-health practice detected across 1 family in the upstream repository

Checks run against github.com/mathatter/ddesonn on 2026-08-09.

Git structural (1)
.gitattributes
How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies
19 external dependencies (excludes base and recommended)
Depends (1)
R >= 4.1.0
LinkingTo (0)
none
Enhances (0)
none
Reverse dependencies
0direct
0indirect

Nothing depends on this yet.

Code & Tests

People & History

People (1)
Maintainer (1)
Author, Maintainer
Authors (1)
Author, Maintainer
Package Timeline

2 releases. Pick two to compare their code metrics. R releases are shown for context.

  • R
    R 4.6.0 released · 2026-04-24
  • 7.1.11Latest
    2026-03-11 · current release · diff ↗
  • 7.1.9
    2026-03-10
  • R
    R 4.5.0 released · 2025-04-11

Package metadata

First published
2026-03-03
Total releases
2 / 1 yrs
License
MIT + file LICENSE OSI
Minimum R
≥ 4.1.0
Download size
9.8 MB
Installed size
not tracked yet
With dependencies
not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("DDESONN")
Fok, M. W. A. (2026). DDESONN: A Deep Dynamic Experimental Self-Organizing Neural Network Framework (Version 7.1.11) [Computer software]. https://doi.org/10.32614/CRAN.package.DDESONN

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

APA

Balamuta, J. J. (2026). R Observatory: Metrics for DDESONN version 7.1.11 [Data set]. HJJB, LLC. Data release v2026-08-15. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-15, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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