ComBatFamQC

Description

Provides a comprehensive framework for batch effect diagnostics, harmonization, and post-harmonization downstream analysis. Features include interactive visualization tools, robust statistical tests, and a range of harmonization techniques. Additionally, 'ComBatFamQC' enables the creation of life-span age trend plots with estimated age-adjusted centiles and facilitates the generation of covariate-corrected residuals for analytical purposes. Methods for harmonization are based on approaches described in Johnson et al., (2007) <doi:10.1093/biostatistics/kxj037>, Beer et al., (2020) <doi:10.1016/j.neuroimage.2020.117129>, Pomponio et al., (2020) <doi:10.1016/j.neuroimage.2019.116450>, and Chen et al., (2021) <doi:10.1002/hbm.25688>.

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Trend: +30.1% (30d vs prior 30d)

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Running ‘testthat.R’ [60s/29s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > # This file is part of the standard setup for testthat.
  > # It is recommended that you do not modify it.
  > #
  > # Where should you do additional 
...[truncated]...
ep.R:19:3
   2.   └─base::cbind(vis_df, residual_ml_df)
   3.     └─base::cbind(deparse.level, ...)
   4.       └─base::data.frame(..., check.names = FALSE)
  
  [ FAIL 1 | WARN 101 | SKIP 0 | PASS 238 ]
  Error:
  ! Test failures.
  Execution halted

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