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Cascade

Selection, Reverse-Engineering and Prediction in Cascade Networks

v2.4 · Apr 30, 2026 · GPL (>= 2)

Description

A modeling tool allowing gene selection, reverse engineering, and prediction in cascade networks. Jung, N., Bertrand, F., Bahram, S., Vallat, L., and Maumy-Bertrand, M. (2014) <doi:10.1093/bioinformatics/btt705>.

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CRAN Check Status

13 OK
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Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE May 7, 2026
WARNING 13 OK · 0 NOTE · 1 WARNING · 0 ERROR · 0 FAILURE Mar 28, 2026
WARNING r-devel-linux-x86_64-debian-gcc

sizes of PDF files under ‘inst/doc’

‘gs+qpdf’ made some significant size reductions:
     compacted ‘E-MTAB-1475_re-analysis.pdf’ from 550Kb to 174Kb
  consider running tools::compactPDF(gs_quality = "ebook") on these files,
  or build the source package with --compact-vignettes=both
OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Reverse Dependencies (1)

imports

Dependency Network

Dependencies Reverse dependencies abind animation cluster igraph lars lattice limma nnls stats4 tnet VGAM SelectBoost Cascade

Version History

8 tracked
updated 2.4 ← 2.3 diff Apr 30, 2026
new 2.3 Mar 10, 2026
updated 2.3 ← 2.2 diff Sep 18, 2025
updated 2.2 ← 2.1 diff Aug 20, 2025
updated 2.1 ← 2.0 diff Nov 27, 2022
updated 2.0 ← 1.8 diff Mar 18, 2021
updated 1.8 ← 1.7 diff Aug 23, 2019
new 1.7 Feb 17, 2019