R Observatory: Metrics for CLME version 2.0-13

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

CLME

2.0-13Package record

Constrained Inference for Linear Mixed Effects Models

0packages depend

4.9Kdownloads / year

0.0%test coverage

13/13flavors OK

Overview

About

Maintained by Casey M. JelsemaCRAN page ↗GitHub ↗Issues ↗

Estimation and inference for linear models where some or all of the fixed-effects coefficients are subject to order restrictions. This package uses the robust residual bootstrap methodology for inference, and can handle some structure in the residual variance matrix.

Changes in 2.0-13

Removed dependency on prettyR from summary_clme

From NEWS in the release

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("CLME", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("jelsema/CLME")

Development version from jelsema/CLME. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-clme

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-CLME

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-CLME

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 2.7 min · r-oldrel-windows-x86_64

Status changes

OK13 OK2026-08-05
NOTE12 OK, 1 NOTE2026-08-01
OK12 OK2026-04-25
NOTE14 NOTE2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 2.0-13

README· In the repository, left out of the releaseVignettesNoNEWSYes · 100% structured · mentions 2.0-13Citation fileYes · cites a publicationWebsitenot declared in DESCRIPTION

Cites a JSS article

Help pages: 35includes a package overview page
Examples that run: 65%20 run in a plain check · 11 never run
Exported functions with examples: 93%
Documented parameters: 99%
Return-value docs: 86%
Help pages citing references: 11%

How these are measured

Downloads

4.9K

CRAN downloads in the past year

Rank #6,309 · ~13/day · ~404/mo

Releases R versions

Daily download trend is not available in this view yet.

50830 days

1.3K90 days

4.9K1 year

Compare downloads with other packages →

Also on131 r2u21 autocran52 c2d4u

How downloads are counted

Repository

jelsema/clme ↗Account: jelsema

2Stars

3Forks

0Open issues

1Open PRs

0Releases

66Commits

2Commit identities

66 commits · Last activity 2026-04-06 · 0% stars, 30d

Responsiveness

How these are sampled

PRs merged (all time): 100%
Median days to close, 50 most recently updated closed issues: not measured
Median days to close, 50 most recently updated closed PRs: 0

Stars over time

2024-03-25 · 22026-07-07 · 2

How these are measured

PracticesBeta

2 development-tooling and community-health practices detected across 2 families in the upstream repository

Checks run against github.com/jelsema/clme on 2026-10-11.

CRAN release process (1)

cran-comments.md

Lint, format, editor (1)

RStudio project

How this is detected·Detection ruleset v3 (2026-09-26)

Dependencies

Declared dependencies

7 external dependencies (excludes base and recommended)

Installing CLME adds 55 packages (32 with compiled code, 55 MB of source tarballs). Heaviest: stringi 11 MB, bslib 5.6 MB, lme4 4.1 MB.

Depends (4)

R >= 4.0.0shiny lme4MASS

Imports (8)

nlmemethodsDT isotone stringrstatsopenxlsxgraphics

LinkingTo (0)

none

Suggests (2)

testthatnnet

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

Datasets

People & History

People (2)

Casey M. Jelsema

Author, Maintainer since 1.0-1 (2014)

Shyamal D. Peddada

Author · added in 2.0-4

Releases (11)

Pick two releases to compare their code metrics.

R
R 4.6.0 released · 2026-04-24
2.0-13Latest
record
2026-04-06 · current release · diff ↗
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
2.0-12
record
2020-06-07 · diff ↗
R
R 4.0.0 released · 2020-04-24
R
R 3.6.0 released · 2019-04-26
2.0-11
record
2019-02-07 · diff ↗
2.0-10
record
2018-05-23 · diff ↗
R
R 3.5.0 released · 2018-04-23
2.0-9
record
2018-02-01 · diff ↗
2.0-8
record
2017-12-08 · diff ↗
R
R 3.4.0 released · 2017-04-21

Show 8 earlier eventsHide 8 earlier events

2.0-6
record
2016-11-08 · diff ↗ ·
removed 1 export
sigma
R
R 3.3.0 released · 2016-05-03
2.0-4
record
2015-07-13 · diff ↗ ·
removed 1 export
pattern:^[^\\.]

added 21 exports
VarCorr, as.clme, clme, clme_em, clme_em_fixed, clme_em_mixed, clme_resids, create.constraints, fixed.effects, is.clme, lrt.stat, minque, model_terms_clme, random.effects, resid_boot, shinyServer_clme, shinyUI_clme, shiny_clme, sigma, w.stat, w.stat.ind
R
R 3.2.0 released · 2015-04-16
2.0-2
record
2015-01-27 · diff ↗
2.0-1
record
2014-12-05 · diff ↗
1.0-1
record
2014-10-17
R
R 3.1.0 released · 2014-04-10

Package metadata

First published: 2014-10-17
Total releases: 11 / 12 yrs
License: GPL-3 OSI
Minimum R: ≥ 4.0.0
Bundled data: 12 KB / 3 files
Download size: 147 KB

Appears in task views

Mixed, Multilevel, and Hierarchical Models in R

Cite

Cite this package

Run in R for the authors' entry:

citation("CLME")

The package provides a citation file, so citation() returns the authors' own entry.

It points to 10.18637/jss.v075.i01, 10.1371/journal.pone.0084778.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for CLME version 2.0-13 [Data set]. HJJB, LLC. Data release v2026-10-18. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-18, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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