R Observatory: Metrics for BIEN version 1.2.8

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

BIEN

1.2.8

Tools for Accessing the Botanical Information and Ecology Network Database

6packages depend

68.2Kdownloads / year

54.6%test coverage

13/13checks pass

Overview

About

Maintained by Brian MaitnerFirst published 2017-01-1210 releasesCRAN page ↗

Provides Tools for Accessing the Botanical Information and Ecology Network Database. The BIEN database contains cleaned and standardized botanical data including occurrence, trait, plot and taxonomic data (See https://bien.nceas.ucsb.edu/bien/ for more Information). This package provides functions that query the BIEN database by constructing and executing optimized SQL queries.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)

install.packages("BIEN", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-bien

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-BIEN

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

Health

CRAN checks

13OK

Slowest check: 5.8 min · r-oldrel-windows-x86_64

Code health

Yes

Tests · ratio 0.07

54.6%

Coverage · measured lines

100%

Documentation · exports

8

Dependencies · direct

Check history

OK2026-08-22
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-08-20
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-04-26
12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Show 3 earlier snapshots

ERROR2026-04-19
13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-04-09
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-03-10
13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE

Documentation

READMEYes · 93 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 2%
Documented parameters: 100%
Return-value docs: 100%
References docs: 1%

Downloads

68.2K

CRAN downloads in the past year

Rank #1,739 · ~187/day · ~5.7K/mo

Releases R versions

Daily download trend is not available in this view yet.

4K30 days

13.1K90 days

68.2K1 year

Compare downloads with other packages →

Also on247 r2u1.3K conda_forge

Dependencies

Declared dependencies

12 external dependencies (excludes base and recommended)

Depends (2)

R >= 4.1.0RPostgreSQL

Imports (7)

DBI ape sf terra doParallelparallelforeach

LinkingTo (0)

none

Suggests (5)

knitr rmarkdown testthat curl maps

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

6direct

3indirect

RuHere occCite rangeModelMetadata GVS S4DM wallace

Code & Tests

People & History

People (1)

Maintainer (1)

Brian Maitner

Author, Maintainer

Authors (1)

Brian Maitner

Author, Maintainer

Package Timeline

10 releases. Pick two to compare their code metrics. R releases are shown for context.

1.2.8Latest
2026-04-30 · current release · diff ↗
R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
1.2.7
2025-01-31 · diff ↗
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
1.2.6
2023-01-06 · diff ↗
R
R 4.2.0 released · 2022-04-22
1.2.5
2022-02-25 · diff ↗
unarchivedReturned to CRAN
2022-02-25
archivedRemoved from CRAN
2022-01-06
check issues were not corrected in time Seems access to a remote PostgreSQL database
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
1.2.4
2020-02-27 · diff ↗
R
R 3.6.0 released · 2019-04-26
1.2.3
2018-05-09 · diff ↗

Show 7 earlier events

R
R 3.5.0 released · 2018-04-23
1.2.2
2017-08-03 · diff ↗
1.2.1
2017-07-31 · diff ↗
R
R 3.4.0 released · 2017-04-21
1.1.0
2017-03-08 · diff ↗
1.0.0
2017-01-12
R
R 3.3.0 released · 2016-05-03

Package metadata

First published: 2017-01-12
Total releases: 10 / 9 yrs
License: MIT + file LICENSE OSI
Minimum R: ≥ 4.1.0
Download size: 96 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Appears in task views

Network Analysis

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("BIEN")

Format

Maitner, B. (2026). BIEN: Tools for Accessing the Botanical Information and Ecology Network Database (Version 1.2.8) [Computer software]. https://doi.org/10.32614/CRAN.package.BIEN

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for BIEN version 1.2.8 [Data set]. HJJB, LLC. Data release v2026-08-22. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-22, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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