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BCClong

Bayesian Consensus Clustering for Multiple Longitudinal Features

v1.0.3 · Jun 23, 2024 · MIT + file LICENSE

Description

It is very common nowadays for a study to collect multiple features and appropriately integrating multiple longitudinal features simultaneously for defining individual clusters becomes increasingly crucial to understanding population heterogeneity and predicting future outcomes. 'BCClong' implements a Bayesian consensus clustering (BCC) model for multiple longitudinal features via a generalized linear mixed model. Compared to existing packages, several key features make the 'BCClong' package appealing: (a) it allows simultaneous clustering of mixed-type (e.g., continuous, discrete and categorical) longitudinal features, (b) it allows each longitudinal feature to be collected from different sources with measurements taken at distinct sets of time points (known as irregularly sampled longitudinal data), (c) it relaxes the assumption that all features have the same clustering structure by estimating the feature-specific (local) clusterings and consensus (global) clustering.

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Last 90 days

499

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autoCRAN

5

Last 7 days

56

Last 30 days

0

All-time

autoCRAN-only: this name is served only by autoCRAN, so the count is exact.

CRAN Check Status

4 ERROR
9 OK
Show all 13 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 ERROR
r-oldrel-macos-x86_64 ERROR
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 ERROR
r-release-macos-x86_64 ERROR
r-release-windows-x86_64 OK
Check details (4 non-OK)
ERROR r-oldrel-macos-arm64

package dependencies

Package required but not available: ‘mixAK’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
ERROR r-oldrel-macos-x86_64

package dependencies

Package required but not available: ‘mixAK’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
ERROR r-release-macos-arm64

package dependencies

Package required but not available: ‘mixAK’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
ERROR r-release-macos-x86_64

package dependencies

Package required but not available: ‘mixAK’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.

Check History

ERROR 8 OK · 1 NOTE · 0 WARNING · 5 ERROR · 0 FAILURE Mar 10, 2026
ERROR r-devel-macos-arm64

package dependencies

Package required but not available: ‘mixAK’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
ERROR r-release-macos-arm64

package dependencies

Package required but not available: ‘mixAK’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
ERROR r-release-macos-x86_64

package dependencies

Package required but not available: ‘mixAK’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
ERROR r-oldrel-macos-arm64

package dependencies

Package required but not available: ‘mixAK’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
ERROR r-oldrel-macos-x86_64

package dependencies

Package required but not available: ‘mixAK’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
NOTE r-oldrel-windows-x86_64

installed package size

installed size is  6.0Mb
  sub-directories of 1Mb or more:
    data   3.3Mb
    doc    1.2Mb
    libs   1.4Mb

Code

Structure

Lines of code

3,918

Files

60

Compiled share

31.1%

Has compiled src

Yes

Language breakdown

R 1,467 (37.4%)C/C++/src 1,220 (31.1%)Tests 168 (4.3%)Docs 565 (14.4%)Vignettes 498 (12.7%)

API

Exported functions

5

Internal functions

5

Recent export changes

v1.0.0+5 BCC.multi, BayesT, model.selection.criteria +2 more

Testing & CI

Has tests

Yes

Test-to-code ratio

0.11

testthat edition

3

CI present

No

CI type

[]

PR gated

No

Docs

Return-value doc rate

100%

\dontrun example ratio

0%

Roxygen coverage

100%

Has pkgdown

No

NEWS present

No

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

100%

Unsafe pattern score

0

Dep constraint coverage

5.3%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

3.5.0

System requirements

C++ standard

License

MIT + file LICENSE

License flags

SPDX valid, OSI approved

History

Versions

4

First release

2023-01-13

Latest release

2024-06-24

Avg cadence

181 days

Cold removal rate

Dep drift

2

LOC over versions

v1.0.0: 3,428 LOCv1.0.1: 3,393 LOCv1.0.2: 3,392 LOCv1.0.3: 3,918 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/cran-code-metrics.

Dependency Network

Dependencies Reverse dependencies cluster coda ggplot2 label.switching LaplacesDemon lme4 MASS mclust MCMCpack mixAK mvtnorm nnet Rcpp Rmpfr truncdist +2 more dependencies BCClong

Version History

5 tracked
new 1.0.3 Mar 10, 2026
updated 1.0.3 ← 1.0.2 diff Jun 23, 2024
updated 1.0.2 ← 1.0.1 diff Feb 4, 2024
updated 1.0.1 ← 1.0.0 diff Aug 7, 2023
new 1.0.0 Jan 12, 2023