abundance
Bundled with tximportData · provided in inst/extdata, read by path with system.file()
Class
data.frame
Dimensions
200,401 × 5
Missing
0
Format
tsv · gzip
6.2 MB
File
inst/extdata/kallisto/ERR188021/abundance.tsv.gz
Fingerprint
8acf12ea
About this object
Equal-length columns presented as a table, R's standard rectangular format. R object catalogue
Columns
Column
Type
Distinct
Missing
Summary
integer9,31908 – 205012mean 1499
Min.
8
1st Qu.
551
Median
793
Mean
1498.83
3rd Qu.
1900
Max.
205012
Std. dev
1894.98
Skewness
14.37
Kurtosis
951.5
Outliers
15,6640 low · 15664 high
numeric121,43903.6667 – 177034mean 1322
Min.
3.6667
1st Qu.
376.399
Median
626.041
Mean
1321.94
3rd Qu.
1733.64
Max.
177034
Std. dev
1825.02
Skewness
12.1
Kurtosis
679.1
Outliers
15,0600 low · 15060 high
numeric90,73600 – 589938mean 143.2
Min.
0
1st Qu.
0
Median
1
Mean
143.226
3rd Qu.
13.9553
Max.
589938
Std. dev
2407.05
Skewness
124.8
Kurtosis
2.354e+4
Zeros
96,516
Outliers
34,4100 low · 34410 high
numeric99,38500 – 13916.7mean 4.99
Min.
0
1st Qu.
0
Median
0.0239
Mean
4.99
3rd Qu.
0.7737
Max.
13916.7
Std. dev
111.804
Skewness
80.19
Kurtosis
8080
Zeros
96,516
Outliers
30,2550 low · 30255 high
Same structure in 1 other dataset
These datasets share the same columns and types but hold different data.
Version history
| Version | Released | Size | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 200,401 × 5 | Unchanged | tsv · gzip 6.2 MB | degraded |
| 3.22 | 2025-10-29 | 200,401 × 5 | Unchanged | tsv · gzip 6.2 MB | degraded |
| 3.21 | 2025-04-15 | 200,401 × 5 | Unchanged | tsv · gzip 6.2 MB | degraded |
| 3.20 | 2024-10-29 | 200,401 × 5 | Unchanged | tsv · gzip 6.2 MB | degraded |
| 3.19 | 2024-04-30 | 200,401 × 5 | Unchanged | tsv · gzip 6.2 MB | degraded |
| 3.18 | 2023-10-24 | 200,401 × 5 | Unchanged | tsv · gzip 6.2 MB | degraded |
| 3.17 | 2023-04-25 | 200,401 × 5 | Unchanged | tsv · gzip 6.2 MB | degraded |
| 3.16 | 2022-11-01 | 200,401 × 5 | Unchanged | tsv · gzip 6.2 MB | degraded |
| 3.15 | 2022-04-26 | 200,401 × 5 | Unchanged | tsv · gzip 6.2 MB | degraded |
| 3.14 | 2021-10-26 | 200,401 × 5 | Unchanged | tsv · gzip 6.2 MB | degraded |
| 3.13 | 2021-05-19 | 200,401 × 5 | Unchanged | tsv · gzip 6.2 MB | degraded |
| 3.12 | 2020-10-27 | 200,401 × 5 | Unchanged | tsv · gzip 6.2 MB | degraded |
| 3.11 | 2020-04-27 | 200,401 × 5 | Unchanged | tsv · gzip 6.2 MB | degraded |
| 3.10 | 2019-10-29 | 200,401 × 5 | Unchanged | tsv · gzip 6.2 MB | degraded |
| 3.9 | 2019-05-02 | 200,401 × 5 | Unchanged | tsv · gzip 6.2 MB | degraded |
| 3.8 | 2018-10-30 | 200,401 × 5 | Unchanged | tsv · gzip 6.2 MB | degraded |
| 3.7 | 2018-04-30 | 200,401 × 5 | Data changed Dimensions 48,009 × 5 → 200,401 × 5 | tsv · gzip 6.2 MB | degraded |
| 3.6 | 2017-10-30 | 48,009 × 5 | Unchanged | tsv · none 1.6 MB | degraded |
| 3.5 | 2017-08-16 | 48,009 × 5 | – | tsv · none 1.6 MB | degraded |
Dimensions is the row and column count.