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microglial_counts

log-normalized count data from microglial cells in the p6 mouse cortex.

Bundled with projectR · exported, loads via data()

Class
dgTMatrix
S4 · Matrix
Dimensions
2,996 × 415
Missing
0
Format
rda · xz
version 2 · 180 KB
File
data/microglial_counts.rda
Fingerprint
d0ecc7d3
Format documented
Yes
Source
Source not stated
About this object

A sparse matrix in triplet form (row index, column index, value per entry). Easy to build incrementally, then converted to compressed form for computation. R object catalogue

Values

Computed over the stored entries only, not over every cell. The implicit zeros are excluded.

numeric
Stored entries
100,968
Missing
0
Min.
0.420244
1st Qu.
1.00638
Median
1.37564
Mean
1.72572
3rd Qu.
1.97998
Max.
10.4603
Std. dev
1.13162
Distinct
8,653
Skewness
2.25
Kurtosis
6.563
Outliers
8,052 0 low · 8052 high
Sparse storage
Stored entries
100,968
Cells
1,243,340
Density
8.1%
Shape
general
Storage
triplet
Value type
double
Columns

This object is 415 columns wide. A dgTMatrix carries no per-column schema, so its width is what the catalogue records and there is nothing to list one column at a time. What it holds is described whole instead, summarised over its stored entries: see Values above.

Structure fingerprint

1 other dataset carries the same structure fingerprint. That fingerprint is a digest of the column names and their types, and a dgTMatrix carries neither, so a match is not another object with the same columns. Nor is it one of the same width: on this kind the same fingerprint is carried at more than one width. The datasets are not listed, because that is not a list of anything this one is related to.

Version history
VersionReleasedSizeChangeStored asConfidence
3.232026-04-282,996 × 415Unchangedrda · xz
version 2 · 180 KB
exact
3.222025-10-292,996 × 415Unchangedrda · xz
version 2 · 180 KB
exact
3.212025-04-152,996 × 415Unchangedrda · xz
version 2 · 180 KB
exact
3.202024-10-292,996 × 415Unchangedrda · xz
version 2 · 180 KB
exact
3.192024-04-302,996 × 415Unchangedrda · xz
version 2 · 180 KB
exact
3.182023-10-242,996 × 415–rda · xz
version 2 · 180 KB
exact

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