generic1.CpG
Bundled with methylKit · ships in inst/extdata, read by path with system.file()
Class
data.frame
Dimensions
6 × 6
Missing
0
Format
tsv · none
223 B
File
inst/extdata/generic1.CpG.txt
Fingerprint
b72c2562
About this object
A list of equal-length columns presented as a table. Almost everything rectangular in R inherits from it, which is why the class column so often has more than one entry. R object catalogue
Columns
Column
Type
Distinct
Missing
Summary
chr
character
1
0
5 characters
startinteger609826907 – 9906677mean 9.868e+6
Min.
9826907
1st Qu.
9.8533e+6
Median
9856726
Mean
9.86783e+6
3rd Qu.
9.89503e+6
Max.
9906677
Std. dev
32164.4
Skewness
0.2105
Kurtosis
-1.84
strand
character
2
0
1 characters
coverageinteger5014 – 96mean 40.17
Min.
14
1st Qu.
14.5
Median
17
Mean
40.1667
3rd Qu.
66.75
Max.
96
Std. dev
38.4625
Skewness
0.5618
Kurtosis
-1.888
freqCnumeric6018.75 – 100mean 77.76
Min.
18.75
1st Qu.
80.8025
Median
88.195
Mean
77.7617
3rd Qu.
91.8675
Max.
100
Std. dev
29.7463
Skewness
-1.195
Kurtosis
-0.3502
Outliers
11 low · 0 high
freqTnumeric600 – 81.25mean 22.24
Min.
0
1st Qu.
8.1325
Median
11.805
Mean
22.2383
3rd Qu.
19.1975
Max.
81.25
Std. dev
29.7463
Skewness
1.195
Kurtosis
-0.3502
Zeros
1
Outliers
10 low · 1 high
Version history
| Version | Released | Rows × Cols | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 6 × 6 | Unchanged | tsv · none 223 B | degraded |
| 3.22 | 2025-10-29 | 6 × 6 | Unchanged | tsv · none 223 B | degraded |
| 3.21 | 2025-04-15 | 6 × 6 | Unchanged | tsv · none 223 B | degraded |
| 3.20 | 2025-02-28 | 6 × 6 | Unchanged | tsv · none 223 B | degraded |
| 3.19 | 2024-04-30 | 6 × 6 | Unchanged | tsv · none 223 B | degraded |
| 3.18 | 2023-10-24 | 6 × 6 | Unchanged | tsv · none 223 B | degraded |
| 3.17 | 2023-04-25 | 6 × 6 | Unchanged | tsv · none 223 B | degraded |
| 3.16 | 2022-11-01 | 6 × 6 | Unchanged | tsv · none 223 B | degraded |
| 3.15 | 2022-04-26 | 6 × 6 | Unchanged | tsv · none 223 B | degraded |
| 3.14 | 2021-10-26 | 6 × 6 | Unchanged | tsv · none 223 B | degraded |
| 3.13 | 2021-05-19 | 6 × 6 | Unchanged | tsv · none 223 B | degraded |
| 3.12 | 2021-01-28 | 6 × 6 | Unchanged | tsv · none 223 B | degraded |
| 3.11 | 2020-05-20 | 6 × 6 | Unchanged | tsv · none 223 B | degraded |
| 3.10 | 2019-10-29 | 6 × 6 | Unchanged | tsv · none 223 B | degraded |
| 3.9 | 2019-05-02 | 6 × 6 | Unchanged | tsv · none 223 B | degraded |
| 3.8 | 2018-12-11 | 6 × 6 | Unchanged | tsv · none 223 B | degraded |
| 3.7 | 2018-10-11 | 6 × 6 | Unchanged | tsv · none 223 B | degraded |
| 3.6 | 2018-01-22 | 6 × 6 | Unchanged | tsv · none 223 B | degraded |
| 3.5 | 2017-08-24 | 6 × 6 | Unchanged | tsv · none 223 B | degraded |
| 3.4 | 2016-10-17 | 6 × 6 | – | tsv · none 223 B | degraded |