scmgene
Subtype Clustering Model using only ESR1, ERBB2 and AURKA genes for identification of breast cancer molecular subtypes
Bundled with genefu · exported, loads via data()
Class
list
Elements
3
Missing
0
Format
rda · gzip
version 2 · 552 B
File
data/scmgene.rda
Fingerprint
a443cc07
Format documented
Yes
Source
http://clincancerres.aacrjournals.org/content/14/16/5158.abstract?ck=nck
About this object
R's general-purpose container. Elements can be any type and any size. R object catalogue
Structure
Distinct
3
Nesting depth
3
Element length
1 – 3
Total length
7
Elements
Element
Type
Distinct
Missing
Summary
parameterslist30nested
Element length
3 – 7
Total length
16
Nesting depth
2
What is inside it
Element
Type
Distinct
Missing
Summary
pronumeric300.1657 – 0.5407mean 0.3333
Min.
0.1657
1st Qu.
0.2297
Median
0.2936
Mean
0.3333
3rd Qu.
0.4172
Max.
0.5407
Std. dev
0.1906
Skewness
0.1994
Kurtosis
-2.333
meannumeric60-0.6916 – 0.762·2 × 3 matrixmean -0.0901
Min.
-0.6916
1st Qu.
-0.6058
Median
-0.2774
Mean
-0.0901
3rd Qu.
0.4251
Max.
0.762
Std. dev
0.6396
Skewness
0.3437
Kurtosis
-1.948
variancelist70nested
Element length
1 – 12
Total length
22
cutoff.AURKA
numeric
1
0
-0.2128
modlist30character
Element class
character
Element length
3 – 3
Total length
9
What is inside it
Element
Type
Distinct
Missing
Summary
ESR1
character
3
0
1 – 9 characters
ERBB2
character
3
0
1 – 11 characters
AURKA
character
3
0
1 – 11 characters
Version history
| Version | Released | Size | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 1.0.9 | 2010-08-25 | 3 elements | Unchanged | rda · gzip version 2 · 552 B | exact |
| 1.0.8 | 2010-07-26 | 3 elements | – | rda · gzip version 2 · 552 B | exact |