gm03563

Public CGH data of Snijders

Bundled with RJaCGH · exported, loads via data()

Class

data.frame

Dimensions

2,271 × 6

Missing

155

Format

rda · xz

version 2 · 185 KB

File

data/snijders.RData

Fingerprint

9c681254

Source

http://www.nature.com/ng/journal/v29/n3/suppinfo/ng754_S1.html

About this object

Equal-length columns presented as a table, R's standard rectangular format. R object catalogue

Declared attributes

Row names

Yes

Columns

Column

Type

Distinct

Missing

Summary

PosOrder

integer

2,271

1 – 2271mean 1136

Min.

1st Qu.

568.5

Median

1136

Mean

1136

3rd Qu.

1703.5

Max.

2271

Std. dev

655.726

Skewness

-5.084e-17

Kurtosis

-1.202

Order

ascending

LogRatio

numeric

2,100

155

-0.9262 – 0.7137mean 0.0047

Min.

-0.9262

1st Qu.

-0.0624

Median

-0.0015

Mean

0.0047

3rd Qu.

0.0569

Max.

0.7137

Std. dev

0.1236

Skewness

1.071

Kurtosis

8.051

Outliers

8517 low · 68 high

Longest gap

Leading

PosBase

integer

2,003

0 – 245000mean 7.28e+4

Min.

1st Qu.

30259

Median

62929

Mean

72799.5

3rd Qu.

107951

Max.

245000

Std. dev

53798.3

Skewness

0.7896

Kurtosis

-0.0058

Zeros

Outliers

200 low · 20 high

Chromosome

integer

1 – 23mean 9.963

Min.

1st Qu.

Median

Mean

9.9635

3rd Qu.

Max.

Std. dev

5.8918

Skewness

0.4276

Kurtosis

-0.7085

Order

ascending

BAC

factor

2,238

CTB-102E193CTB-112f72CTB-142o242CTB-339E122CTB-36f162GS1-202O82+2,232 more

Levels

2,238

Used

2,238

Rows per level, the 50 commonest of 2,238

CTB-102E193CTB-112f72CTB-142o242CTB-339E122CTB-36f162GS1-202O82GS-249b102RP11-105K052RP11-10G102RP11-119j202RP11-13c202RP11-149G122RP11-172D022RP11-175H202RP11-188C102RP11-1l222RP11-204M162RP11-20K042RP11-221P072RP11-238h102RP11-261b202RP11-268N022RP11-30m012RP11-31b062RP11-32H112RP11-39a082RP11-67j022RP11-72c062RP11-83O142RP11-94M132RP11-99M062RP1- 97b162CTA-799f101CTB-110j241CTB-111H211CTB-11o231CTB-120n121CTB-124g91CTB-129F161CTB-134O191CTB-136O141CTB-138N021CTB-140E31CTB-141D221CTB-146A21CTB-148D31CTB-159E101CTB-162H91CTB-162P221CTB-166E201

Statut

factor

Normal2,219Trisomy50Monosomy2

The same data in 1 other package

This data is identical to the data these packages carry, down to the byte.

GLADBioconductor

Same structure in 14 other datasets

These datasets share the same columns and types but hold different data.

RJaCGHgm00143 RJaCGHgm01524 RJaCGHgm01535 RJaCGHgm01750 RJaCGHgm02948 RJaCGHgm03134 RJaCGHgm03576 RJaCGHgm04435 RJaCGHgm05296 RJaCGHgm07081 RJaCGHgm07408 RJaCGHgm10315 RJaCGHgm13031 RJaCGHgm13330

Version history

Version	Released	Size	Change	Stored as	Confidence
2.0.4	2015-07-06	2,271 × 6	Unchanged	rda · xz version 2 · 185 KB	exact
2.0.3	2011-10-10	2,271 × 6	Unchanged	rda · xz version 2 · 185 KB	exact
2.0.2	2011-10-10	2,271 × 6	Unchanged	rda · xz version 2 · 185 KB	exact
2.0.1	2011-03-21	2,271 × 6	Repackaged	rda · xz version 2 · 185 KB	exact
2.0.0	2009-03-04	2,271 × 6	Unchanged	rda · none version 2 · 1.9 MB	exact
1.5.7	2008-10-22	2,271 × 6	Unchanged	rda · none version 2 · 1.9 MB	exact
1.5.6	2008-10-10	2,271 × 6	Unchanged	rda · none version 2 · 1.9 MB	exact
1.5.5	2008-09-11	2,271 × 6	Unchanged	rda · none version 2 · 1.9 MB	exact
1.5.4	2008-06-27	2,271 × 6	Unchanged	rda · none version 2 · 1.9 MB	exact
1.5.3	2008-06-27	2,271 × 6	Unchanged	rda · none version 2 · 1.9 MB	exact
1.2.5	2008-04-22	2,271 × 6	Unchanged	rda · none version 2 · 1.9 MB	exact
1.2.4	2008-04-01	2,271 × 6	Unchanged	rda · none version 2 · 1.9 MB	exact
1.2.2	2008-02-28	2,271 × 6	Unchanged	rda · none version 2 · 1.9 MB	exact
1.2.1	2008-01-14	2,271 × 6	Unchanged	rda · none version 2 · 1.9 MB	exact
1.2.0	2007-12-07	2,271 × 6	Unchanged	rda · none version 2 · 1.9 MB	exact
1.1.1	2007-05-07	2,271 × 6	Unchanged	rda · none version 2 · 1.9 MB	exact
1.0.2	2007-04-19	2,271 × 6	Unchanged	rda · none version 2 · 1.9 MB	exact
1.0.1	2007-01-22	2,271 × 6	Unchanged	rda · none version 2 · 1.9 MB	exact
1.0.0	2006-11-06	2,271 × 6	Unchanged	rda · none version 2 · 1.9 MB	exact
0.5.1	2006-11-06	2,271 × 6	Unchanged	rda · none version 2 · 1.9 MB	exact
0.5	2006-11-06	2,271 × 6	Unchanged	rda · none version 2 · 1.9 MB	exact
0.4	2006-07-14	2,271 × 6	Unchanged	rda · none version 2 · 1.9 MB	exact
0.3	2006-07-14	2,271 × 6	–	rda · none version 2 · 1.9 MB	exact