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logRratio

Bundled with MinimumDistance · provided in inst/extdata, read by path with system.file()

Class
matrix
Dimensions
550 × 6
Missing
2
Format
rda · gzip
version 2 · 7.4 KB
File
inst/extdata/logRratio.rda
Fingerprint
c87649e3
About this object
A flat block of values with dimensionsA block of cells sharing every edge, with nothing above the columns and nothing in it: a name here is hung on the whole block rather than on one column.

A single vector with a dim attribute. All elements share one type. R object catalogue

Values

Computed over every cell in the object, reading it as one vector.

integer
Cells
3,300
Missing
2
Min.
-77
1st Qu.
-7
Median
0
Mean
0.311401
3rd Qu.
9
Max.
69
Std. dev
14.5829
Distinct
113
Skewness
-0.1505
Kurtosis
1.83
Zeros
214 6.5%
Outliers
120 70 low · 50 high
Longest missing run
1
Margins

The mean of each row, and of each column, summarised. Reading every cell as one vector gives a matrix and its transpose the same answer; these do not.

MarginMin.1st Qu.MedianMean3rd Qu.Max.Std. dev
Rows-29.833-4.500.315514.333332.8337.8977
Columns-0.58029-0.30909-0.215460.310861.09321.68731.0083

The row means vary far more than the column means, so what separates the values runs down the rows.

Dimensions and labels
MarginLabelsCount
Rowsrs4907007, rs2808212, rs10489860, rs625658, rs12747042, rs12032765, rs11581020, rs1887054, rs4970615, rs4623688, rs16855691, rs236291, …550
ColumnsNA06993, NA06985, NA06991, NA11881, NA11882, NA108596
Columns

This object is 6 columns wide. A matrix carries no per-column schema, so its width is what the catalogue records and there is nothing to list one column at a time. What it holds is described whole instead, summarised over every cell: see Values and Margins above.

Structure fingerprint

9 other datasets carry the same structure fingerprint. That fingerprint is a digest of the column names and their types, and a matrix carries neither, so on one it comes down to the width and the type held: a match is another object of 6 columns holding the same type rather than one with the same columns. The datasets are not listed, because that is not a list of anything this one is related to.

Version history
VersionReleasedSizeChangeStored asConfidence
3.232026-04-28550 × 6Unchangedrda · gzip
version 2 · 7.4 KB
exact
3.222025-10-29550 × 6Unchangedrda · gzip
version 2 · 7.4 KB
exact
3.212025-05-08550 × 6Unchangedrda · gzip
version 2 · 7.4 KB
exact
3.202024-10-29550 × 6Unchangedrda · gzip
version 2 · 7.4 KB
exact
3.192024-04-30550 × 6Unchangedrda · gzip
version 2 · 7.4 KB
exact
3.182023-10-24550 × 6Unchangedrda · gzip
version 2 · 7.4 KB
exact
3.172023-04-25550 × 6Unchangedrda · gzip
version 2 · 7.4 KB
exact
3.162022-11-01550 × 6Unchangedrda · gzip
version 2 · 7.4 KB
exact
3.152022-04-26550 × 6Unchangedrda · gzip
version 2 · 7.4 KB
exact
3.142021-10-26550 × 6Unchangedrda · gzip
version 2 · 7.4 KB
exact
3.132021-05-19550 × 6Unchangedrda · gzip
version 2 · 7.4 KB
exact
3.122020-10-27550 × 6Unchangedrda · gzip
version 2 · 7.4 KB
exact
3.112020-04-27550 × 6Unchangedrda · gzip
version 2 · 7.4 KB
exact
3.102019-10-29550 × 6Unchangedrda · gzip
version 2 · 7.4 KB
exact
3.92019-05-02550 × 6Unchangedrda · gzip
version 2 · 7.4 KB
exact
3.82018-10-30550 × 6Unchangedrda · gzip
version 2 · 7.4 KB
exact
3.72018-05-01550 × 6Unchangedrda · gzip
version 2 · 7.4 KB
exact
3.62017-10-30550 × 6Unchangedrda · gzip
version 2 · 7.4 KB
exact
3.52017-04-24550 × 6Unchangedrda · gzip
version 2 · 7.4 KB
exact
3.42016-10-17550 × 6Unchangedrda · gzip
version 2 · 7.4 KB
exact
3.32016-05-03550 × 6Unchangedrda · gzip
version 2 · 7.4 KB
exact
3.22015-10-13550 × 6Unchangedrda · gzip
version 2 · 7.4 KB
exact
3.12015-04-16550 × 6Unchangedrda · gzip
version 2 · 7.4 KB
exact
3.02015-02-11550 × 6Unchangedrda · gzip
version 2 · 7.4 KB
exact
2.142014-09-30550 × 6Unchangedrda · gzip
version 2 · 7.4 KB
exact
2.132013-10-14550 × 6Unchangedrda · gzip
version 2 · 7.4 KB
exact
2.122013-04-03550 × 6Unchangedrda · gzip
version 2 · 7.4 KB
exact
2.112013-03-14550 × 6Unchangedrda · gzip
version 2 · 7.4 KB
exact
2.102012-05-01550 × 6–rda · gzip
version 2 · 7.4 KB
exact

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