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regulatory_interactions

Regulatory interactions from OmniPath and TRRUST

Bundled with MetaboSignal · exported, loads via data()

Class
matrix
Dimensions
50,566 × 7
Missing
0
Format
rda · xz
version 2 · 669 KB
File
data/regulatory_interactions.rda
Fingerprint
0d62f5f0
Format documented
Yes
Source
Source not stated
About this object
A flat block of values with dimensionsA block of cells sharing every edge, with nothing above the columns and nothing in it: a name here is hung on the whole block rather than on one column.

A single vector with a dim attribute. All elements share one type. R object catalogue

Values

Computed over every cell in the object, reading it as one vector.

character
Cells
353,962
Missing
0
Distinct
47,658
Length in characters
0 – 3,674
Dimensions and labels
MarginLabelsCount
Columnssource_entrez, source_symbol, target_entrez, target_symbol, interaction_type, database_reference, literature_reference7
Columns

This object is 7 columns wide. A matrix carries no per-column schema, so its width is what the catalogue records and there is nothing to list one column at a time. What it holds is described whole instead, summarised over every cell: see Values above.

Structure fingerprint

6 other datasets carry the same structure fingerprint. That fingerprint is a digest of the column names and their types, and a matrix carries neither, so on one it comes down to the width and the type held: a match is another object of 7 columns holding the same type rather than one with the same columns. The datasets are not listed, because that is not a list of anything this one is related to.

Version history
VersionReleasedSizeChangeStored asConfidence
3.232026-07-2150,566 × 7Unchangedrda · xz
version 2 · 669 KB
exact
3.222025-10-2950,566 × 7Unchangedrda · xz
version 2 · 669 KB
exact
3.212025-04-1550,566 × 7Unchangedrda · xz
version 2 · 669 KB
exact
3.202024-10-2950,566 × 7Unchangedrda · xz
version 2 · 669 KB
exact
3.192024-04-3050,566 × 7Unchangedrda · xz
version 2 · 669 KB
exact
3.182023-12-1650,566 × 7Unchangedrda · xz
version 2 · 669 KB
exact
3.172023-09-1150,566 × 7Unchangedrda · xz
version 2 · 669 KB
exact
3.162022-11-0150,566 × 7Unchangedrda · xz
version 2 · 669 KB
exact
3.152022-07-2750,566 × 7Unchangedrda · xz
version 2 · 669 KB
exact
3.142021-10-2650,566 × 7Unchangedrda · xz
version 2 · 669 KB
exact
3.132021-05-1950,566 × 7Unchangedrda · xz
version 2 · 669 KB
exact
3.122020-10-2750,566 × 7Unchangedrda · xz
version 2 · 669 KB
exact
3.112020-04-2750,566 × 7Unchangedrda · xz
version 2 · 669 KB
exact
3.102019-10-2950,566 × 7Unchangedrda · xz
version 2 · 669 KB
exact
3.92019-05-0250,566 × 7Unchangedrda · xz
version 2 · 669 KB
exact
3.82018-10-3050,566 × 7Unchangedrda · xz
version 2 · 669 KB
exact
3.72018-04-3050,566 × 7Unchangedrda · xz
version 2 · 669 KB
exact
3.62017-10-3050,566 × 7–rda · xz
version 2 · 669 KB
exact

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