summary.data
Example of output from dataSummarizationPTM function for non-TMT data
Bundled with MSstatsPTM · exported, loads via data()
Class
list
Elements
2
Missing
0
Format
rda · gzip
version 3 · 68 KB
File
data/summary.data.rda
Fingerprint
b51880c8
Format documented
Yes
Source
Source not stated
About this object
R's general-purpose container. Elements can be any type and any size. R object catalogue
Structure
Distinct
2
Nesting depth
3
Element length
3 – 3
Total length
6
Nested rows
5,270
Nested columns
15
Nested schema
varies between elements
Elements
Element
Type
Distinct
Missing
Summary
PTMlist30nested·4,207 rows nested·15 cols
Element length
1 – 15
Total length
27
Nesting depth
2
Nested rows
4,207
What is inside it
Element
Type
Distinct
Missing
Summary
FeatureLevelDatalist120nested
Element length
2,928 – 2,928
Total length
43,920
ProteinLevelDatalist110nested
Element length
1,279 – 1,279
Total length
14,069
SummaryMethod
character
1
0
3 characters
PROTEINlist30nested·1,063 rows nested·15 cols
Element length
1 – 15
Total length
27
Nesting depth
2
Nested rows
1,063
What is inside it
Element
Type
Distinct
Missing
Summary
FeatureLevelDatalist120nested
Element length
768 – 768
Total length
11,520
ProteinLevelDatalist110nested
Element length
295 – 295
Total length
3,245
SummaryMethod
character
1
0
3 characters
The nested tables do not share one set of columns, so there is no single schema to show.
Version history
| Version | Released | Size | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 2 elements | Unchanged | rda · gzip version 3 · 68 KB | exact |
| 3.22 | 2025-10-29 | 2 elements | Unchanged | rda · gzip version 3 · 68 KB | exact |
| 3.21 | 2025-08-25 | 2 elements | Unchanged | rda · gzip version 3 · 68 KB | exact |
| 3.20 | 2024-11-25 | 2 elements | Unchanged | rda · gzip version 3 · 68 KB | exact |
| 3.19 | 2024-09-24 | 2 elements | Data changed Class, Type, Missing and Distinct unchanged | rda · gzip version 3 · 68 KB | exact |
| 3.18 | 2024-02-13 | 2 elements | Unchanged | rda · xz version 3 · 51 KB | exact |
| 3.17 | 2023-06-27 | 2 elements | Unchanged | rda · xz version 3 · 51 KB | exact |
| 3.16 | 2023-02-28 | 2 elements | Unchanged | rda · xz version 3 · 51 KB | exact |
| 3.15 | 2022-04-26 | 2 elements | Unchanged | rda · xz version 3 · 51 KB | exact |
| 3.14 | 2021-12-21 | 2 elements | Unchanged | rda · xz version 3 · 51 KB | exact |
| 3.13 | 2021-10-06 | 2 elements | – | rda · xz version 3 · 51 KB | exact |
Class is the chain of classes R records on the object, most specific first. The facts above give the short name for the same chain. Type is what the values in it are. Missing is how many values were recorded as absent. Distinct is how many different values were counted in the object.