maxq_tmt_evidence
Example MaxQuant evidence file from the output of a TMT experiment
Bundled with MSstatsPTM · exported, loads via data()
Class
data.frame
Dimensions
199 × 96
Missing
1,359
Format
rda · gzip
version 3 · 37 KB
File
data/maxq_tmt_evidence.rda
Fingerprint
e1c46a1e
Format documented
Yes
Source
Source not stated
About this object
Equal-length columns presented as a table, R's standard rectangular format. R object catalogue
Columns
Column
Type
Distinct
Missing
Summary
integer1707 – 32mean 16.78
Min.
7
1st Qu.
11
Median
16
Mean
16.7839
3rd Qu.
20
Max.
32
Std. dev
7.358
Skewness
0.6179
Kurtosis
-0.2592
integer200 – 1mean 0.1256
Min.
0
1st Qu.
0
Median
0
Mean
0.1256
3rd Qu.
0
Max.
1
Std. dev
0.3323
Skewness
2.242
Kurtosis
3.042
Zeros
174
integer200 – 1mean 0.0101
Min.
0
1st Qu.
0
Median
0
Mean
0.0101
3rd Qu.
0
Max.
1
Std. dev
0.1
Skewness
9.75
Kurtosis
93.53
Zeros
197
integer300 – 2mean 1.136
Min.
0
1st Qu.
1
Median
1
Mean
1.1357
3rd Qu.
1
Max.
2
Std. dev
0.3978
Skewness
1.097
Kurtosis
1.817
Zeros
4
integer300 – 2mean 0.4372
Min.
0
1st Qu.
0
Median
0
Mean
0.4372
3rd Qu.
1
Max.
2
Std. dev
0.6153
Skewness
1.08
Kurtosis
0.0932
Zeros
125
integer301 – 3mean 2.03
Min.
1
1st Qu.
1
Median
2
Mean
2.0302
3rd Qu.
3
Max.
3
Std. dev
0.8159
Skewness
-0.0548
Kurtosis
-1.504
numeric1830479.523 – 1321.31mean 779.7
Min.
479.523
1st Qu.
662.36
Median
721.038
Mean
779.72
3rd Qu.
893.584
Max.
1321.31
Std. dev
170.74
Skewness
0.6017
Kurtosis
-0.0591
Outliers
20 low · 2 high
integer302 – 4mean 2.945
Min.
2
1st Qu.
3
Median
3
Mean
2.9447
3rd Qu.
3
Max.
4
Std. dev
0.5963
Skewness
0.0168
Kurtosis
-0.2223
numeric570307.651 – 1167.86mean 608.6
Min.
307.651
1st Qu.
434.84
Median
574.261
Mean
608.551
3rd Qu.
749.573
Max.
1167.86
Std. dev
181.421
Skewness
0.4583
Kurtosis
-0.2616
numeric420720.321 – 3500.56mean 1800
Min.
720.321
1st Qu.
1346.14
Median
1701.76
Mean
1800.42
3rd Qu.
2224.98
Max.
3500.56
Std. dev
675.466
Skewness
0.4892
Kurtosis
-0.4649
numeric172261.2954 – 3.6021·26 NaN
Min.
1.2954
1st Qu.
1.9531
Median
2.3299
Mean
2.3032
3rd Qu.
2.6099
Max.
3.6021
Std. dev
0.4831
Skewness
0.1389
Kurtosis
-0.4461
Outliers
10 low · 1 high
NaN
26of the missing
Longest gap
6
numeric172260.0005 – 0.0025·26 NaN
Min.
0.0005
1st Qu.
0.0011
Median
0.0013
Mean
0.0014
3rd Qu.
0.0017
Max.
0.0025
Std. dev
0.0004
Skewness
0.3477
Kurtosis
-0.1844
Outliers
10 low · 1 high
NaN
26of the missing
Longest gap
6
numeric5826124760 – 690600·26 NaN
Min.
124760
1st Qu.
177700
Median
274160
Mean
302798
3rd Qu.
333090
Max.
690600
Std. dev
151483
Skewness
1.05
Kurtosis
0.2388
Outliers
120 low · 12 high
NaN
26of the missing
Longest gap
6
numeric72676.387 – 229.16·26 NaN
Min.
76.387
1st Qu.
152.78
Median
152.78
Mean
166.022
3rd Qu.
229.16
Max.
229.16
Std. dev
45.0388
Skewness
0.1229
Kurtosis
-0.7793
NaN
26of the missing
Longest gap
6
numeric6026124760 – 690600·26 NaN
Min.
124760
1st Qu.
177700
Median
274160
Mean
302801
3rd Qu.
333090
Max.
690600
Std. dev
151483
Skewness
1.05
Kurtosis
0.2387
Outliers
120 low · 12 high
NaN
26of the missing
Longest gap
6
numeric72676.388 – 229.17·26 NaN
Min.
76.388
1st Qu.
152.78
Median
152.78
Mean
166.023
3rd Qu.
229.16
Max.
229.17
Std. dev
45.0387
Skewness
0.1229
Kurtosis
-0.7793
NaN
26of the missing
Longest gap
6
numeric17326479.523 – 1321.31·26 NaN
Min.
479.523
1st Qu.
662.359
Median
750.89
Mean
783.385
3rd Qu.
893.415
Max.
1321.31
Std. dev
175.495
Skewness
0.559
Kurtosis
-0.0935
Outliers
20 low · 2 high
NaN
26of the missing
Longest gap
6
numeric194040.119 – 148.19mean 84.69
Min.
40.119
1st Qu.
58.5305
Median
73.474
Mean
84.6944
3rd Qu.
115.645
Max.
148.19
Std. dev
29.1398
Skewness
0.4389
Kurtosis
-1.189
numeric17400.111 – 2.9218mean 0.7773
Min.
0.111
1st Qu.
0.442
Median
0.6786
Mean
0.7773
3rd Qu.
1
Max.
2.9218
Std. dev
0.4634
Skewness
1.834
Kurtosis
4.833
Outliers
70 low · 7 high
numeric194040.119 – 148.19mean 84.69
Min.
40.119
1st Qu.
58.5305
Median
73.474
Mean
84.6944
3rd Qu.
115.645
Max.
148.19
Std. dev
29.1398
Skewness
0.4389
Kurtosis
-1.189
numeric192039.619 – 147.69mean 84.36
Min.
39.619
1st Qu.
58.203
Median
73.126
Mean
84.3634
3rd Qu.
115.295
Max.
147.69
Std. dev
29.0965
Skewness
0.4381
Kurtosis
-1.19
numeric193040.512 – 148.69mean 85.14
Min.
40.512
1st Qu.
58.717
Median
73.916
Mean
85.1402
3rd Qu.
116.76
Max.
148.69
Std. dev
29.272
Skewness
0.4363
Kurtosis
-1.203
logical01990 true·0 false
Longest missing run
199
Leading
199
Trailing
199
logical01990 true·0 false
Longest missing run
199
Leading
199
Trailing
199
logical01990 true·0 false
Longest missing run
199
Leading
199
Trailing
199
logical01990 true·0 false
Longest missing run
199
Leading
199
Trailing
199
integer116268 – 492mean 102.1
Min.
8
1st Qu.
42
Median
75
Mean
102.093
3rd Qu.
142
Max.
492
Std. dev
84.4506
Skewness
1.796
Kurtosis
4.008
Outliers
70 low · 7 high
Longest gap
6
integer60263 – 132mean 30.23
Min.
3
1st Qu.
16
Median
24
Mean
30.2312
3rd Qu.
34
Max.
132
Std. dev
22.1311
Skewness
2.159
Kurtosis
5.516
Outliers
120 low · 12 high
Longest gap
6
integer8262 – 9mean 4.514
Min.
2
1st Qu.
3
Median
4
Mean
4.5145
3rd Qu.
6
Max.
9
Std. dev
1.55
Skewness
0.2386
Kurtosis
-0.5338
Longest gap
6
numeric172260.2124 – 1·26 NaN
Min.
0.2124
1st Qu.
0.8048
Median
0.9195
Mean
0.864
3rd Qu.
0.9588
Max.
1
Std. dev
0.1411
Skewness
-1.817
Kurtosis
3.7
Outliers
88 low · 0 high
NaN
26of the missing
Longest gap
6
numeric173260.0001 – 0.1359·26 NaN
Min.
0.0001
1st Qu.
0.001
Median
0.0019
Mean
0.0044
3rd Qu.
0.0031
Max.
0.1359
Std. dev
0.0135
Skewness
8.15
Kurtosis
70.46
Outliers
220 low · 22 high
NaN
26of the missing
Longest gap
6
numeric173260.0007 – 1·26 NaN
Min.
0.0007
1st Qu.
0.0077
Median
0.0199
Mean
0.0465
3rd Qu.
0.0476
Max.
1
Std. dev
0.1152
Skewness
6.749
Kurtosis
49.92
Outliers
100 low · 10 high
NaN
26of the missing
Longest gap
6
numeric19402.8445e-88 – 0.0471mean 0.0048
Min.
2.8445e-88
1st Qu.
4.4678e-13
Median
0
Mean
0.0048
3rd Qu.
0.0029
Max.
0.0471
Std. dev
0.0101
Skewness
2.369
Kurtosis
4.917
Outliers
400 low · 40 high
integer401 – 4mean 1.166
Min.
1
1st Qu.
1
Median
1
Mean
1.1658
3rd Qu.
1
Max.
4
Std. dev
0.4468
Skewness
3.066
Kurtosis
10.9
integer19809783 – 50812mean 2.669e+4
Min.
9783
1st Qu.
16835.5
Median
22388
Mean
26689.7
3rd Qu.
38549.5
Max.
50812
Std. dev
11068
Skewness
0.4374
Kurtosis
-1.2
numeric193042.181 – 244.95mean 97.83
Min.
42.181
1st Qu.
67.116
Median
89.681
Mean
97.8257
3rd Qu.
121.71
Max.
244.95
Std. dev
41.2436
Skewness
0.9589
Kurtosis
0.5159
Outliers
30 low · 3 high
numeric198011.537 – 199.2mean 75.24
Min.
11.537
1st Qu.
38.2005
Median
67.365
Mean
75.2373
3rd Qu.
99.236
Max.
199.2
Std. dev
44.3201
Skewness
0.8005
Kurtosis
-0.0315
Outliers
30 low · 3 high
integer1001 – 28mean 4.427
Min.
1
1st Qu.
2
Median
4
Mean
4.4271
3rd Qu.
5
Max.
28
Std. dev
4.0593
Skewness
3.996
Kurtosis
20.11
Outliers
110 low · 11 high
numeric17226943800 – 7531200000mean 3.594e+8
Min.
943800
1st Qu.
11235000
Median
25679000
Mean
3.59405e+8
3rd Qu.
115980000
Max.
7531200000
Std. dev
1.14656e+9
Skewness
4.668
Kurtosis
22.95
Outliers
250 low · 25 high
Longest gap
6
numeric14600 – 2477300mean 1.128e+5
Min.
0
1st Qu.
0
Median
48569
Mean
112816
3rd Qu.
96628
Max.
2477300
Std. dev
276342
Skewness
5.936
Kurtosis
39.67
Zeros
54
Outliers
190 low · 19 high
numeric14600 – 2331600mean 1.37e+5
Min.
0
1st Qu.
0
Median
59800
Mean
136992
3rd Qu.
123070
Max.
2331600
Std. dev
291198
Skewness
4.492
Kurtosis
23.55
Zeros
54
Outliers
180 low · 18 high
numeric14400 – 1811600mean 9.414e+4
Min.
0
1st Qu.
0
Median
48497
Mean
94135.3
3rd Qu.
97699
Max.
1811600
Std. dev
206690
Skewness
5.701
Kurtosis
37.24
Zeros
56
Outliers
140 low · 14 high
numeric14600 – 2363400mean 1.248e+5
Min.
0
1st Qu.
0
Median
54392
Mean
124845
3rd Qu.
117325
Max.
2363400
Std. dev
281258
Skewness
5.498
Kurtosis
34.18
Zeros
54
Outliers
160 low · 16 high
numeric14600 – 1907500mean 1.035e+5
Min.
0
1st Qu.
0
Median
50582
Mean
103493
3rd Qu.
96510.5
Max.
1907500
Std. dev
227120
Skewness
5.518
Kurtosis
34.18
Zeros
54
Outliers
150 low · 15 high
numeric14600 – 1913400mean 1.124e+5
Min.
0
1st Qu.
0
Median
62040
Mean
112418
3rd Qu.
113445
Max.
1913400
Std. dev
228558
Skewness
5.356
Kurtosis
32.99
Zeros
54
Outliers
130 low · 13 high
numeric14600 – 2589300mean 1.275e+5
Min.
0
1st Qu.
0
Median
57851
Mean
127494
3rd Qu.
116885
Max.
2589300
Std. dev
302443
Skewness
5.75
Kurtosis
36.68
Zeros
54
Outliers
130 low · 13 high
numeric14600 – 2297600mean 1.2e+5
Min.
0
1st Qu.
0
Median
57338
Mean
119984
3rd Qu.
110910
Max.
2297600
Std. dev
267866
Skewness
5.596
Kurtosis
35.26
Zeros
54
Outliers
140 low · 14 high
numeric14600 – 2105700mean 1.207e+5
Min.
0
1st Qu.
0
Median
64368
Mean
120654
3rd Qu.
130705
Max.
2105700
Std. dev
249570
Skewness
5.401
Kurtosis
33.38
Zeros
54
Outliers
120 low · 12 high
numeric14600 – 1864400mean 1.119e+5
Min.
0
1st Qu.
0
Median
57674
Mean
111876
3rd Qu.
108830
Max.
1864400
Std. dev
231394
Skewness
5.274
Kurtosis
31.6
Zeros
54
Outliers
170 low · 17 high
numeric14600 – 2477300mean 1.128e+5
Min.
0
1st Qu.
0
Median
48569
Mean
112816
3rd Qu.
96628
Max.
2477300
Std. dev
276342
Skewness
5.936
Kurtosis
39.67
Zeros
54
Outliers
190 low · 19 high
numeric14600 – 2331600mean 1.37e+5
Min.
0
1st Qu.
0
Median
59800
Mean
136992
3rd Qu.
123070
Max.
2331600
Std. dev
291198
Skewness
4.492
Kurtosis
23.55
Zeros
54
Outliers
180 low · 18 high
numeric14400 – 1811600mean 9.414e+4
Min.
0
1st Qu.
0
Median
48497
Mean
94135.3
3rd Qu.
97699
Max.
1811600
Std. dev
206690
Skewness
5.701
Kurtosis
37.24
Zeros
56
Outliers
140 low · 14 high
numeric14600 – 2363400mean 1.248e+5
Min.
0
1st Qu.
0
Median
54392
Mean
124845
3rd Qu.
117325
Max.
2363400
Std. dev
281258
Skewness
5.498
Kurtosis
34.18
Zeros
54
Outliers
160 low · 16 high
numeric14600 – 1907500mean 1.035e+5
Min.
0
1st Qu.
0
Median
50582
Mean
103493
3rd Qu.
96510.5
Max.
1907500
Std. dev
227120
Skewness
5.518
Kurtosis
34.18
Zeros
54
Outliers
150 low · 15 high
numeric14600 – 1913400mean 1.124e+5
Min.
0
1st Qu.
0
Median
62040
Mean
112418
3rd Qu.
113445
Max.
1913400
Std. dev
228558
Skewness
5.356
Kurtosis
32.99
Zeros
54
Outliers
130 low · 13 high
numeric14600 – 2589300mean 1.275e+5
Min.
0
1st Qu.
0
Median
57851
Mean
127494
3rd Qu.
116885
Max.
2589300
Std. dev
302443
Skewness
5.75
Kurtosis
36.68
Zeros
54
Outliers
130 low · 13 high
numeric14600 – 2297600mean 1.2e+5
Min.
0
1st Qu.
0
Median
57338
Mean
119984
3rd Qu.
110910
Max.
2297600
Std. dev
267866
Skewness
5.596
Kurtosis
35.26
Zeros
54
Outliers
140 low · 14 high
numeric14600 – 2105700mean 1.207e+5
Min.
0
1st Qu.
0
Median
64368
Mean
120654
3rd Qu.
130705
Max.
2105700
Std. dev
249570
Skewness
5.401
Kurtosis
33.38
Zeros
54
Outliers
120 low · 12 high
numeric14600 – 1864400mean 1.119e+5
Min.
0
1st Qu.
0
Median
57674
Mean
111876
3rd Qu.
108830
Max.
1864400
Std. dev
231394
Skewness
5.274
Kurtosis
31.6
Zeros
54
Outliers
170 low · 17 high
integer400 – 3mean 0.8442
Min.
0
1st Qu.
0
Median
1
Mean
0.8442
3rd Qu.
1
Max.
3
Std. dev
0.612
Skewness
0.2283
Kurtosis
0.1002
Zeros
54
Outliers
10 low · 1 high
integer400 – 3mean 0.8442
Min.
0
1st Qu.
0
Median
1
Mean
0.8442
3rd Qu.
1
Max.
3
Std. dev
0.612
Skewness
0.2283
Kurtosis
0.1002
Zeros
54
Outliers
10 low · 1 high
integer400 – 3mean 0.8342
Min.
0
1st Qu.
0
Median
1
Mean
0.8342
3rd Qu.
1
Max.
3
Std. dev
0.6176
Skewness
0.2449
Kurtosis
0.0392
Zeros
56
Outliers
10 low · 1 high
integer400 – 3mean 0.8442
Min.
0
1st Qu.
0
Median
1
Mean
0.8442
3rd Qu.
1
Max.
3
Std. dev
0.612
Skewness
0.2283
Kurtosis
0.1002
Zeros
54
Outliers
10 low · 1 high
integer400 – 3mean 0.8442
Min.
0
1st Qu.
0
Median
1
Mean
0.8442
3rd Qu.
1
Max.
3
Std. dev
0.612
Skewness
0.2283
Kurtosis
0.1002
Zeros
54
Outliers
10 low · 1 high
integer400 – 3mean 0.8442
Min.
0
1st Qu.
0
Median
1
Mean
0.8442
3rd Qu.
1
Max.
3
Std. dev
0.612
Skewness
0.2283
Kurtosis
0.1002
Zeros
54
Outliers
10 low · 1 high
integer400 – 3mean 0.8442
Min.
0
1st Qu.
0
Median
1
Mean
0.8442
3rd Qu.
1
Max.
3
Std. dev
0.612
Skewness
0.2283
Kurtosis
0.1002
Zeros
54
Outliers
10 low · 1 high
integer400 – 3mean 0.8442
Min.
0
1st Qu.
0
Median
1
Mean
0.8442
3rd Qu.
1
Max.
3
Std. dev
0.612
Skewness
0.2283
Kurtosis
0.1002
Zeros
54
Outliers
10 low · 1 high
integer400 – 3mean 0.8442
Min.
0
1st Qu.
0
Median
1
Mean
0.8442
3rd Qu.
1
Max.
3
Std. dev
0.612
Skewness
0.2283
Kurtosis
0.1002
Zeros
54
Outliers
10 low · 1 high
integer400 – 3mean 0.8442
Min.
0
1st Qu.
0
Median
1
Mean
0.8442
3rd Qu.
1
Max.
3
Std. dev
0.612
Skewness
0.2283
Kurtosis
0.1002
Zeros
54
Outliers
10 low · 1 high
integer1990125 – 16650mean 7279
Min.
125
1st Qu.
3129.5
Median
9121
Mean
7279.45
3rd Qu.
12932.5
Max.
16650
Std. dev
5187.95
Skewness
-0.0873
Kurtosis
-1.503
Order
ascending
integer31042 – 5604mean 2403
Min.
42
1st Qu.
1013.5
Median
3006
Mean
2402.8
3rd Qu.
4300
Max.
5604
Std. dev
1734.99
Skewness
-0.0621
Kurtosis
-1.501
Order
ascending
integer42050 – 6369mean 2729
Min.
50
1st Qu.
1155
Median
3391
Mean
2728.53
3rd Qu.
4888
Max.
6369
Std. dev
1967.09
Skewness
-0.0544
Kurtosis
-1.496
Order
ascending
integer1990154 – 19212mean 8489
Min.
154
1st Qu.
3627.5
Median
10667
Mean
8489.44
3rd Qu.
15040.5
Max.
19212
Std. dev
6021.06
Skewness
-0.1021
Kurtosis
-1.508
Order
ascending
logical01990 true·0 false
Longest missing run
199
Leading
199
Trailing
199
Version history
| Version | Released | Size | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 199 × 96 | Unchanged | rda · gzip version 3 · 37 KB | exact |
| 3.22 | 2025-10-29 | 199 × 96 | Unchanged | rda · gzip version 3 · 37 KB | exact |
| 3.21 | 2025-08-25 | 199 × 96 | Unchanged | rda · gzip version 3 · 37 KB | exact |
| 3.20 | 2024-11-25 | 199 × 96 | Unchanged | rda · gzip version 3 · 37 KB | exact |
| 3.19 | 2024-09-24 | 199 × 96 | Unchanged | rda · gzip version 3 · 37 KB | exact |
| 3.18 | 2024-02-13 | 199 × 96 | Unchanged | rda · gzip version 3 · 37 KB | exact |
| 3.17 | 2023-06-27 | 199 × 96 | – | rda · gzip version 3 · 37 KB | exact |