fgseaRes

`fgseaRes`

Bundled with DeeDeeExperiment · exported, loads via data()

Class

data.table

data.table/data.frame

Dimensions

4,576 × 8

Missing

Format

rda · xz

version 3 · 113 KB

File

data/fgseaRes.RData

Fingerprint

f2e7500c

Format documented

Yes

Source

Source not stated

About this object

A data.frame with a sort-order key for fast joins and lookups. After loading from an .rda file, the internal self-reference needs refreshing via setalloccol(). R object catalogue

Declared attributes

Other attributes

Read by name, kind and length, with the value where it is short enough to show. No rule here knows what any of them means.

Attribute	Holds	Length
.internal.selfref	NULL	0

Columns

Column

Type

Distinct

Missing

Summary

pathway

character

4,576

8 – 147 characters

pval

numeric

2,664

0.0002 – 0.999mean 0.4664

Min.

0.0002

1st Qu.

0.2122

Median

0.446

Mean

0.4664

3rd Qu.

0.7018

Max.

0.999

Std. dev

0.2841

Skewness

0.1513

Kurtosis

-1.172

padj

numeric

300

0.3813 – 0.999mean 0.8959

Min.

0.3813

1st Qu.

0.8459

Median

0.8909

Mean

0.8959

3rd Qu.

0.9347

Max.

0.999

Std. dev

0.0548

Skewness

-0.9082

Kurtosis

7.048

Outliers

1818 low · 0 high

numeric

2,685

-1 – 1mean -0.0013

Min.

-1

1st Qu.

-0.6412

Median

0.2229

Mean

-0.0013

3rd Qu.

0.6448

Max.

Std. dev

0.6599

Skewness

0.0013

Kurtosis

-1.668

NES

numeric

2,685

-2.02 – 1.8962mean 0.0042

Min.

-2.02

1st Qu.

-1.0368

Median

0.4525

Mean

0.0042

3rd Qu.

1.0386

Max.

1.8962

Std. dev

1.0565

Skewness

-0.0085

Kurtosis

-1.793

Order

descending

nMoreExtreme

numeric

2,602

7 – 63715mean 2.351e+4

Min.

1st Qu.

10584.8

Median

22324

Mean

23509.5

3rd Qu.

35313.8

Max.

63715

Std. dev

14533.6

Skewness

0.2119

Kurtosis

-1.082

size

integer

1 – 99mean 6.107

Min.

1st Qu.

Median

Mean

6.1073

3rd Qu.

Max.

Std. dev

10.8696

Skewness

4.085

Kurtosis

20.32

Outliers

5020 low · 502 high

leadingEdge

list

1,806

character

Element class

character

Element length

1 – 30

Total length

11,157

What is inside it

Element

Type

Distinct

Missing

Summary

[[1]]

character

4 – 8 characters

[[2]]

character

4 – 8 characters

[[3]]

character

4 – 7 characters

[[4]]

character

4 – 8 characters

[[5]]

character

4 – 7 characters

[[6]]

character

4 – 8 characters

[[7]]

character

4 – 7 characters

[[8]]

character

4 – 6 characters

[[9]]

character

4 – 8 characters

[[10]]

character

4 – 8 characters

[[11]]

character

4 – 7 characters

[[12]]

character

4 – 8 characters

[[13]]

character

4 – 7 characters

[[14]]

character

4 – 7 characters

[[15]]

character

4 – 6 characters

[[16]]

character

4 – 7 characters

[[17]]

character

4 – 7 characters

[[18]]

character

4 – 7 characters

[[19]]

character

4 – 8 characters

[[20]]

character

4 – 8 characters

[[21]]

character

4 – 7 characters

[[22]]

character

4 – 8 characters

[[23]]

character

4 – 5 characters

[[24]]

character

4 – 8 characters

[[25]]

character

4 – 6 characters

[[26]]

character

4 – 5 characters

[[27]]

character

4 – 7 characters

[[28]]

character

4 – 7 characters

[[29]]

character

4 – 8 characters

[[30]]

character

4 – 7 characters

[[31]]

character

4 – 7 characters

[[32]]

character

5 – 7 characters

[[33]]

character

4 – 5 characters

[[34]]

character

6 characters

[[35]]

character

4 – 5 characters

[[36]]

character

4 – 8 characters

[[37]]

character

4 – 5 characters

[[38]]

character

4 – 5 characters

[[39]]

character

4 – 7 characters

[[40]]

character

4 – 5 characters

[[41]]

character

4 – 8 characters

[[42]]

character

4 – 7 characters

[[43]]

character

4 – 5 characters

[[44]]

character

4 characters

[[45]]

character

4 – 6 characters

[[46]]

character

4 – 7 characters

[[47]]

character

4 – 7 characters

[[48]]

character

4 – 8 characters

[[49]]

character

4 – 7 characters

[[50]]

character

4 – 7 characters

Same structure in 1 other dataset

These datasets share the same columns and types but hold different data.

GeneTonic

Version history

Version	Released	Size	Change	Stored as	Confidence
3.23	2026-04-28	4,576 × 8	Unchanged	rda · xz version 3 · 113 KB	exact
3.22	2025-10-29	4,576 × 8	–	rda · xz version 3 · 113 KB	exact