MMLSUM
MMLSUM Amino Acid Substitution Matrices
Bundled with DECIPHER · exported, loads via data()
Class
array
Dimensions
21 × 21 × 9
Missing
0
Format
rda · xz
version 3 · 12 KB
File
data/MMLSUM.RData
Fingerprint
731e7ab9
Format documented
Yes
Source
Sumanaweera, D., et al. (2022). Bridging the gaps in statistical models of protein alignment. *Bioinformatics*, **38(Supplement_1)**, i228-i237.
About this object
A multidimensional matrix. R treats a two-dimensional array as a matrix. R object catalogue
Values
Computed over every cell in the object, reading it as one vector.
numeric
Cells
3,969
Missing
0
Min.
-24
1st Qu.
-8.08665
Median
-3.8805
Mean
-4.60417
3rd Qu.
-0.963
Max.
18
Std. dev
6.10613
Distinct
1,901
Skewness
-0.09069
Kurtosis
1.614
Outliers
200 98 low · 102 high
Dimensions and labels
| Margin | Labels | Count |
|---|---|---|
| Rows | A, R, N, D, C, Q, E, G, H, I, L, K, … | 21 |
| Columns | A, R, N, D, C, Q, E, G, H, I, L, K, … | 21 |
| Dimension 3 | 10, 20, 30, 40, 50, 60, 70, 80, 90 | 9 |
Version history
| Version | Released | Size | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-07-30 | 21 × 21 × 9 | Unchanged | rda · xz version 3 · 12 KB | exact |
| 3.22 | 2025-10-29 | 21 × 21 × 9 | Unchanged | rda · xz version 3 · 12 KB | exact |
| 3.21 | 2025-04-15 | 21 × 21 × 9 | Unchanged | rda · xz version 3 · 12 KB | exact |
| 3.20 | 2024-10-29 | 21 × 21 × 9 | Unchanged | rda · xz version 3 · 12 KB | exact |
| 3.19 | 2024-04-30 | 21 × 21 × 9 | Unchanged | rda · xz version 3 · 12 KB | exact |
| 3.18 | 2023-10-24 | 21 × 21 × 9 | – | rda · xz version 3 · 12 KB | exact |