sdc
Salivary duct carcinoma transcriptoms
Bundled with BulkSignalR · exported, loads via data()
Class
data.frame
Dimensions
19,764 × 26
Missing
0
Format
rda · bzip2
version 2 · 830 KB
File
data/sdc.rda
Fingerprint
b7a3e507
Format documented
Yes
Source
https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE138581
About this object
Equal-length columns presented as a table, R's standard rectangular format. R object catalogue
Declared attributes
Row names
Yes
Columns
Column
Type
Distinct
Missing
Summary
integer5,67300 – 508697mean 2294
Min.
0
1st Qu.
22
Median
601
Mean
2294.28
3rd Qu.
2197
Max.
508697
Std. dev
9215.47
Skewness
28.61
Kurtosis
1189
Zeros
3,282
Outliers
1,8680 low · 1868 high
integer6,24900 – 2167042mean 3186
Min.
0
1st Qu.
7
Median
530
Mean
3185.59
3rd Qu.
2576.25
Max.
2167042
Std. dev
21454.8
Skewness
63.35
Kurtosis
5631
Zeros
3,948
Outliers
2,0460 low · 2046 high
integer6,10400 – 1670687mean 3083
Min.
0
1st Qu.
17
Median
637
Mean
3082.59
3rd Qu.
2496.25
Max.
1670687
Std. dev
21623.1
Skewness
48.41
Kurtosis
2988
Zeros
3,168
Outliers
2,0120 low · 2012 high
integer6,53600 – 1093500mean 3334
Min.
0
1st Qu.
26
Median
751
Mean
3333.91
3rd Qu.
2982.5
Max.
1093500
Std. dev
17178.6
Skewness
39.79
Kurtosis
2153
Zeros
2,818
Outliers
1,9460 low · 1946 high
integer6,09000 – 2094760mean 3134
Min.
0
1st Qu.
9
Median
544.5
Mean
3133.75
3rd Qu.
2451
Max.
2094760
Std. dev
23830.2
Skewness
55.08
Kurtosis
3921
Zeros
3,822
Outliers
2,0860 low · 2086 high
integer6,22100 – 964312mean 2849
Min.
0
1st Qu.
18
Median
657
Mean
2848.79
3rd Qu.
2677
Max.
964312
Std. dev
12781.8
Skewness
40.16
Kurtosis
2502
Zeros
3,204
Outliers
1,9090 low · 1909 high
integer6,19400 – 535911mean 2647
Min.
0
1st Qu.
29
Median
702
Mean
2647.19
3rd Qu.
2616
Max.
535911
Std. dev
8424.07
Skewness
24.6
Kurtosis
1150
Zeros
2,791
Outliers
1,9020 low · 1902 high
integer5,71000 – 1487275mean 2564
Min.
0
1st Qu.
13
Median
494
Mean
2564.13
3rd Qu.
2123
Max.
1487275
Std. dev
16373.4
Skewness
60.18
Kurtosis
4758
Zeros
3,442
Outliers
2,0250 low · 2025 high
integer5,33600 – 754676mean 2196
Min.
0
1st Qu.
17
Median
509.5
Mean
2196.14
3rd Qu.
1888.25
Max.
754676
Std. dev
12116.6
Skewness
38.26
Kurtosis
1963
Zeros
3,250
Outliers
1,9460 low · 1946 high
integer5,95700 – 782276mean 2674
Min.
0
1st Qu.
18
Median
626
Mean
2674.26
3rd Qu.
2368.25
Max.
782276
Std. dev
11020.4
Skewness
29.68
Kurtosis
1572
Zeros
3,107
Outliers
1,9030 low · 1903 high
integer6,77200 – 495190mean 3281
Min.
0
1st Qu.
24
Median
766
Mean
3281.15
3rd Qu.
3170.5
Max.
495190
Std. dev
11231.1
Skewness
21.55
Kurtosis
744.4
Zeros
2,807
Outliers
1,8760 low · 1876 high
integer4,29100 – 872770mean 1331
Min.
0
1st Qu.
11
Median
325
Mean
1330.93
3rd Qu.
1255
Max.
872770
Std. dev
8624.39
Skewness
68.58
Kurtosis
6122
Zeros
3,859
Outliers
1,8810 low · 1881 high
integer5,19200 – 1870314mean 2147
Min.
0
1st Qu.
10
Median
411
Mean
2147.2
3rd Qu.
1716.5
Max.
1870314
Std. dev
15847
Skewness
87.11
Kurtosis
9866
Zeros
3,279
Outliers
2,0900 low · 2090 high
integer6,61700 – 695049mean 3091
Min.
0
1st Qu.
31
Median
817
Mean
3090.99
3rd Qu.
2979
Max.
695049
Std. dev
10855.4
Skewness
26.98
Kurtosis
1256
Zeros
2,819
Outliers
1,9160 low · 1916 high
integer6,58700 – 453897mean 3059
Min.
0
1st Qu.
26
Median
756
Mean
3059.37
3rd Qu.
2963
Max.
453897
Std. dev
9475.17
Skewness
16.81
Kurtosis
502.5
Zeros
2,970
Outliers
1,9100 low · 1910 high
integer6,47400 – 845966mean 3174
Min.
0
1st Qu.
16
Median
708.5
Mean
3174.12
3rd Qu.
2838.25
Max.
845966
Std. dev
13938.9
Skewness
31.43
Kurtosis
1506
Zeros
3,259
Outliers
1,9420 low · 1942 high
integer6,11200 – 1056156mean 2937
Min.
0
1st Qu.
19
Median
660
Mean
2936.61
3rd Qu.
2509.25
Max.
1056156
Std. dev
17433.4
Skewness
39.76
Kurtosis
2030
Zeros
2,604
Outliers
1,8700 low · 1870 high
integer6,05000 – 427261mean 2769
Min.
0
1st Qu.
16
Median
656
Mean
2769.26
3rd Qu.
2529.25
Max.
427261
Std. dev
10325.1
Skewness
17.82
Kurtosis
470.8
Zeros
2,591
Outliers
1,8020 low · 1802 high
integer6,37200 – 593915mean 2948
Min.
0
1st Qu.
30
Median
819
Mean
2947.89
3rd Qu.
2879.25
Max.
593915
Std. dev
11258.1
Skewness
26.01
Kurtosis
1005
Zeros
2,433
Outliers
1,6890 low · 1689 high
integer4,20800 – 5038037mean 1963
Min.
0
1st Qu.
8
Median
260
Mean
1962.53
3rd Qu.
1122
Max.
5038037
Std. dev
42000.3
Skewness
95.4
Kurtosis
1.076e+4
Zeros
3,122
Outliers
2,0490 low · 2049 high
integer5,99700 – 750624mean 2591
Min.
0
1st Qu.
30
Median
709
Mean
2590.54
3rd Qu.
2444
Max.
750624
Std. dev
10717.9
Skewness
32.98
Kurtosis
1768
Zeros
2,433
Outliers
1,7100 low · 1710 high
integer6,47800 – 443264mean 3107
Min.
0
1st Qu.
17
Median
703
Mean
3106.96
3rd Qu.
2887.5
Max.
443264
Std. dev
10302.8
Skewness
17.21
Kurtosis
521.1
Zeros
2,783
Outliers
1,8480 low · 1848 high
integer4,90000 – 5099757mean 3016
Min.
0
1st Qu.
11
Median
406.5
Mean
3016.4
3rd Qu.
1596
Max.
5099757
Std. dev
64023.8
Skewness
57.19
Kurtosis
3628
Zeros
3,165
Outliers
1,9100 low · 1910 high
integer5,73700 – 571595mean 2441
Min.
0
1st Qu.
15
Median
602
Mean
2440.77
3rd Qu.
2220
Max.
571595
Std. dev
10443.3
Skewness
25.01
Kurtosis
922.5
Zeros
2,837
Outliers
1,7750 low · 1775 high
integer6,32100 – 663872mean 2957
Min.
0
1st Qu.
29
Median
852.5
Mean
2956.6
3rd Qu.
2833
Max.
663872
Std. dev
12091.5
Skewness
28.61
Kurtosis
1222
Zeros
2,457
Outliers
1,6860 low · 1686 high
integer5,34700 – 1780526mean 2613
Min.
0
1st Qu.
13
Median
528
Mean
2612.64
3rd Qu.
1948.75
Max.
1780526
Std. dev
24646
Skewness
52.78
Kurtosis
3319
Zeros
2,875
Outliers
1,7840 low · 1784 high
Version history
| Version | Released | Size | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 19,764 × 26 | Unchanged | rda · bzip2 version 2 · 830 KB | exact |
| 3.22 | 2026-04-01 | 19,764 × 26 | Unchanged | rda · bzip2 version 2 · 830 KB | exact |
| 3.21 | 2025-09-27 | 19,764 × 26 | – | rda · bzip2 version 2 · 830 KB | exact |