pcs_38k
HWE-normalized PCA scores for 3202 thousand-genomes samples genotyped with the telomere-to-telomere reference
Bundled with BiocHail · exported, loads via data()
Class
data.frame
Dimensions
3,202 × 8
Missing
0
Format
rda · xz
version 3 · 186 KB
File
data/pcs_38k.rda
Fingerprint
738823e3
Format documented
Yes
Source
Source not stated
About this object
Equal-length columns presented as a table, R's standard rectangular format. R object catalogue
Columns
Column
Type
Distinct
Missing
Summary
numeric3,2020-0.1034 – 0.239mean -2.144e-17
Min.
-0.1034
1st Qu.
-0.0815
Median
-0.0724
Mean
-2.1443e-17
3rd Qu.
0.1672
Max.
0.239
Std. dev
0.1225
Skewness
0.9923
Kurtosis
-0.9287
numeric3,2020-0.1474 – 0.1526mean -8.199e-18
Min.
-0.1474
1st Qu.
-0.017
Median
-0.0014
Mean
-8.199e-18
3rd Qu.
0.0512
Max.
0.1526
Std. dev
0.0678
Skewness
-0.3668
Kurtosis
-0.4697
Outliers
222222 low · 0 high
numeric3,2020-0.1457 – 0.1152mean -4.633e-18
Min.
-0.1457
1st Qu.
-0.0069
Median
0.0059
Mean
-4.6331e-18
3rd Qu.
0.0301
Max.
0.1152
Std. dev
0.0447
Skewness
-0.9749
Kurtosis
0.3946
Outliers
507487 low · 20 high
numeric3,2020-0.1303 – 0.1923mean -9.963e-19
Min.
-0.1303
1st Qu.
-0.0196
Median
-0.0022
Mean
-9.963e-19
3rd Qu.
0.0138
Max.
0.1923
Std. dev
0.0392
Skewness
0.9773
Kurtosis
3.4
Outliers
29095 low · 195 high
numeric3,2020-0.0866 – 0.1875mean 2.479e-18
Min.
-0.0866
1st Qu.
-0.0179
Median
-0.0032
Mean
2.4788e-18
3rd Qu.
0.0145
Max.
0.1875
Std. dev
0.0363
Skewness
0.6739
Kurtosis
1.272
Outliers
28771 low · 216 high
numeric3,2020-0.1721 – 0.3084mean -1.131e-17
Min.
-0.1721
1st Qu.
-0.0126
Median
-0.0006
Mean
-1.1309e-17
3rd Qu.
0.0079
Max.
0.3084
Std. dev
0.0361
Skewness
2.918
Kurtosis
17.97
Outliers
217114 low · 103 high
numeric3,2020-0.3026 – 0.1407mean 1.009e-17
Min.
-0.3026
1st Qu.
-0.0047
Median
0.0002
Mean
1.0086e-17
3rd Qu.
0.0057
Max.
0.1407
Std. dev
0.0351
Skewness
-2.07
Kurtosis
15.56
Outliers
508216 low · 292 high
numeric3,2020-0.1296 – 0.3957mean 2.1e-18
Min.
-0.1296
1st Qu.
-0.0056
Median
-0.0005
Mean
2.1004e-18
3rd Qu.
0.0044
Max.
0.3957
Std. dev
0.0333
Skewness
3.06
Kurtosis
26.77
Outliers
699398 low · 301 high
Version history
| Version | Released | Size | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 3,202 × 8 | Unchanged | rda · xz version 3 · 186 KB | exact |
| 3.22 | 2025-10-29 | 3,202 × 8 | Unchanged | rda · xz version 3 · 186 KB | exact |
| 3.21 | 2025-04-15 | 3,202 × 8 | Unchanged | rda · xz version 3 · 186 KB | exact |
| 3.20 | 2025-01-13 | 3,202 × 8 | Unchanged | rda · xz version 3 · 186 KB | exact |
| 3.19 | 2024-04-30 | 3,202 × 8 | Unchanged | rda · xz version 3 · 186 KB | exact |
| 3.18 | 2023-10-24 | 3,202 × 8 | Unchanged | rda · xz version 3 · 186 KB | exact |
| 3.17 | 2023-08-22 | 3,202 × 8 | – | rda · xz version 3 · 186 KB | exact |