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dd.micro

data example (uRNAList)

Bundled with AgiMicroRna · exported, loads via data()

Class
uRNAList
Elements
7
Missing
0
Format
rda · xz
version 2 · 1.2 MB
File
data/dd.micro.rda
Fingerprint
63a6d2f5
Source
Source not stated
Structure
Distinct
7
Nesting depth
2
Element length
1 – 82,422
Total length
329,698
Nested rows
13,743
Nested columns
1
Nested schema
varies between elements
Elements
Element
Type
Distinct
Missing
Summary
TGS
numeric
4,919
0
-4.5015 – 189817·13,737 × 6 matrixmean 705.7
Min.
-4.5015
1st Qu.
-0.7736
Median
0.7508
Mean
705.653
3rd Qu.
13.853
Max.
189817
Std. dev
8721.32
Skewness
17.35
Kurtosis
316.5
Outliers
14,4600 low · 14460 high
TPS
numeric
14,760
0
-2.8422 – 50634.4·13,737 × 6 matrixmean 221.8
Min.
-2.8422
1st Qu.
-0.255
Median
0.2484
Mean
221.786
3rd Qu.
7.0609
Max.
50634.4
Std. dev
2297.09
Skewness
15.8
Kurtosis
270.1
Outliers
14,7240 low · 14724 high
meanS
numeric
26,715
0
38.0159 – 163520·13,737 × 6 matrixmean 575.6
Min.
38.0159
1st Qu.
52.2812
Median
54.5397
Mean
575.599
3rd Qu.
63.1694
Max.
163520
Std. dev
6182.56
Skewness
17.28
Kurtosis
319.8
Outliers
14,9160 low · 14916 high
procS
numeric
82,278
0
-16.8292 – 163467·13,737 × 6 matrixmean 522.3
Min.
-16.8292
1st Qu.
-0.9207
Median
1.0232
Mean
522.264
3rd Qu.
9.7574
Max.
163467
Std. dev
6182.56
Skewness
17.28
Kurtosis
319.8
Outliers
14,9940 low · 14994 high
targets
list
1
0
factor·6 rows nested
Element class
factor
Element length
6 – 6
Total length
6
Nested rows
6
What is inside it
Element
Type
Distinct
Missing
Summary
FileName
factor
6
0
mscA1.txt1mscA2.txt1mscB1.txt1mscB2.txt1mscC1.txt1mscC2.txt1
genes
list
3
0
nested·13,737 rows nested
Element length
13,737 – 13,737
Total length
41,211
Nested rows
13,737
What is inside it
Element
Type
Distinct
Missing
Summary
ControlType
integer
3
0
-1 – 1mean -0.0285
Min.
-1
1st Qu.
0
Median
0
Mean
-0.0285
3rd Qu.
0
Max.
1
Std. dev
0.2619
Skewness
-1.258
Kurtosis
11.14
Zeros
12,784
ProbeName
character
2,466
0
7 – 19 characters
GeneName
character
821
0
4 – 19 characters
other
list
6
0
nested
Element length
82,422 – 82,422
Total length
494,532
What is inside it
Element
Type
Distinct
Missing
Summary
gIsGeneDetected
integer
2
0
0 – 1·13,737 × 6 matrixmean 0.3344
Min.
0
1st Qu.
0
Median
0
Mean
0.3344
3rd Qu.
1
Max.
1
Std. dev
0.4718
Skewness
0.7019
Kurtosis
-1.507
Zeros
54,858
gIsSaturated
integer
1
0
0·13,737 × 6 matrix
gIsFeatNonUnifOL
integer
2
0
0 – 1·13,737 × 6 matrixmean 0.0004
Min.
0
1st Qu.
0
Median
0
Mean
0.0004
3rd Qu.
0
Max.
1
Std. dev
0.0206
Skewness
48.5
Kurtosis
2350
Zeros
82,387
gIsFeatPopnOL
integer
2
0
0 – 1·13,737 × 6 matrixmean 0.0559
Min.
0
1st Qu.
0
Median
0
Mean
0.0559
3rd Qu.
0
Max.
1
Std. dev
0.2298
Skewness
3.865
Kurtosis
12.94
Zeros
77,812
gBGMedianSignal
numeric
51
0
37 – 63547·13,737 × 6 matrixmean 46.73
Min.
37
1st Qu.
44.5
Median
46
Mean
46.7255
3rd Qu.
47
Max.
63547
Std. dev
221.565
Skewness
285.6
Kurtosis
8.185e+4
Outliers
1,690314 low · 1376 high
gBGUsed
numeric
43,417
0
49.1722 – 58.8647·13,737 × 6 matrixmean 53.33
Min.
49.1722
1st Qu.
52.1143
Median
53.4676
Mean
53.3342
3rd Qu.
54.3711
Max.
58.8647
Std. dev
1.4969
Skewness
0.0055
Kurtosis
-0.5798
Outliers
900 low · 90 high

The nested tables do not share one set of columns, so there is no single schema to show.

Version history
VersionReleasedSizeChangeStored asConfidence
3.232026-04-287 elementsUnchangedrda · xz
version 2 · 1.2 MB
exact
3.222025-10-297 elementsUnchangedrda · xz
version 2 · 1.2 MB
exact
3.212025-04-157 elementsUnchangedrda · xz
version 2 · 1.2 MB
exact
3.202024-10-297 elementsUnchangedrda · xz
version 2 · 1.2 MB
exact
3.192024-04-307 elementsUnchangedrda · xz
version 2 · 1.2 MB
exact
3.182023-10-247 elementsUnchangedrda · xz
version 2 · 1.2 MB
exact
3.172023-04-257 elementsUnchangedrda · xz
version 2 · 1.2 MB
exact
3.162022-11-017 elementsUnchangedrda · xz
version 2 · 1.2 MB
exact
3.152022-04-267 elementsUnchangedrda · xz
version 2 · 1.2 MB
exact
3.142021-10-267 elementsUnchangedrda · xz
version 2 · 1.2 MB
exact
3.132021-05-197 elementsUnchangedrda · xz
version 2 · 1.2 MB
exact
3.122020-10-277 elementsUnchangedrda · xz
version 2 · 1.2 MB
exact
3.112020-04-277 elementsUnchangedrda · xz
version 2 · 1.2 MB
exact
3.102019-10-297 elementsUnchangedrda · xz
version 2 · 1.2 MB
exact
3.92019-05-027 elementsUnchangedrda · xz
version 2 · 1.2 MB
exact
3.82018-10-307 elementsUnchangedrda · xz
version 2 · 1.2 MB
exact
3.72018-04-307 elementsUnchangedrda · xz
version 2 · 1.2 MB
exact
3.62017-10-307 elementsUnchangedrda · xz
version 2 · 1.2 MB
exact
3.52017-04-247 elementsUnchangedrda · xz
version 2 · 1.2 MB
exact
3.42016-10-177 elementsUnchangedrda · xz
version 2 · 1.2 MB
exact
3.32016-05-037 elementsUnchangedrda · xz
version 2 · 1.2 MB
exact
3.22015-10-137 elementsUnchangedrda · xz
version 2 · 1.2 MB
exact
3.12015-04-167 elementsUnchangedrda · xz
version 2 · 1.2 MB
exact
3.02014-10-137 elementsUnchangedrda · xz
version 2 · 1.2 MB
exact
2.142014-04-117 elementsUnchangedrda · xz
version 2 · 1.2 MB
exact
2.132013-10-147 elementsUnchangedrda · xz
version 2 · 1.2 MB
exact
2.122013-04-037 elementsUnchangedrda · xz
version 2 · 1.2 MB
exact
2.112012-10-017 elementsUnchangedrda · xz
version 2 · 1.2 MB
exact
2.102012-03-307 elementsRepackagedrda · xz
version 2 · 1.2 MB
exact
2.92011-10-317 elementsUnchangedrda · gzip
version 2 · 1.7 MB
exact
2.82011-04-137 elementsData changed
Class RGList → uRNAList
rda · gzip
version 2 · 1.7 MB
exact
2.72010-10-187 elementsUnchangedrda · gzip
version 2 · 2.1 MB
exact
2.62010-04-227 elementsUnchangedrda · gzip
version 2 · 2.1 MB
exact
2.52009-10-277 elements–rda · gzip
version 2 · 2.1 MB
exact

Class is the chain of classes R records on the object, most specific first. The facts above give the short name for the same chain.

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