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spatialDE

Bioc current

R wrapper for SpatialDE

v1.18.0 · software · MIT + file LICENSE
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Release Lineage

Entered 3.14 · Oct 27, 2021

Current · Requires R 4.6

1.0 In 10 of 49 releases 3.23

Description

SpatialDE is a method to find spatially variable genes (SVG) from spatial transcriptomics data. This package provides wrappers to use the Python SpatialDE library in R, using reticulate and basilisk.

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Topics

Software
Software › ResearchField › Transcriptomics

Depended on by (1)

Bioconductor (1)

scDesign3Workflow

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