samExploreR
Bioc removedsamExploreR package: high-performance read summarisation to count vectors with avaliability of sequencing depth reduction simulation
Release Lineage
Entered 3.5 · Apr 25, 2017
Removed after 3.13 · May 20, 2021
Description
This R package is designed for subsampling procedure to simulate sequencing experiments with reduced sequencing depth. This package can be used to anlayze data generated from all major sequencing platforms such as Illumina GA, HiSeq, MiSeq, Roche GS-FLX, ABI SOLiD and LifeTech Ion PGM Proton sequencers. It supports multiple operating systems incluidng Linux, Mac OS X, FreeBSD and Solaris. Was developed with usage of Rsubread.
None published for Bioconductor
Call graph
Open call graph →Code intelligence has not been computed for this package yet.
Code
Code metrics have not been computed for this package yet.
Topics
Available on
People
Unknown
Cite
Cite this package
Run in R for the authors' preferred citation:
citation("samExploreR")Cite the R Observatory
For a number measured here: a download total, a coverage figure, an archival date.
From data release v2026-10-23, which the citation names so these numbers can be found later. More on citing and the projects behind them.