proBatch

Description

These tools facilitate batch effects analysis and correction in high-throughput experiments. It was developed primarily for mass-spectrometry proteomics (DIA/SWATH), but could also be applicable to most omic data with minor adaptations. The package contains functions for diagnostics (proteome/genome-wide and feature-level), correction (normalization and batch effects correction) and quality control. Non-linear fitting based approaches were also included to deal with complex, mass spectrometry-specific signal drifts.

Code

Code metrics have not been computed for this package yet.

Topics

People

• Yuliya Burankova maintainer
• Jelena Cuklina author
• Chloe H. Lee author
• Patrick Pedrioli author
• Olga Zolotareva author