exomeCopy
Bioc removedCopy number variant detection from exome sequencing read depth
Release Lineage
Entered 2.9 · Nov 1, 2011
Removed after 3.18 · Oct 25, 2023
Description
Detection of copy number variants (CNV) from exome sequencing samples, including unpaired samples. The package implements a hidden Markov model which uses positional covariates, such as background read depth and GC-content, to simultaneously normalize and segment the samples into regions of constant copy count.
None published for Bioconductor
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