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evaluomeR

Bioc current

Evaluation of Bioinformatics Metrics

v1.28.0 · software · GPL-3

Release Lineage

Entered 3.9 · May 3, 2019

Current · Requires R 4.6

1.0 In 15 of 49 releases 3.23

Description

Evaluating the reliability of your own metrics and the measurements done on your own datasets by analysing the stability and goodness of the classifications of such metrics.

Test coverage

Line coverage

Expression

Tests / Examples

Functions

83 22 exported

Complexity

6.4 avg / 60 max

Call network

83 nodes / 80 edges

Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.

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Lowest coverage

Per-function coverage is not measured for this package yet.

Code

Structure

Lines of code

6,135

Files

50

Compiled share

0%

Has compiled src

No

Language breakdown

R 4,486 (73.1%)Tests 327 (5.3%)Docs 888 (14.5%)Vignettes 434 (7.1%)

API

Exported functions

22

Internal functions

60

Recent export changes

v3.9+6 stability, stabilityRange, quality +3 more

Testing & CI

Has tests

Yes

Test-to-code ratio

0.07

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Roxygen coverage

86.4%

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

66.7%

Unsafe pattern score

0

Dep constraint coverage

32%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

3.6

System requirements

C++ standard

License

GPL-3

License flags

SPDX valid, OSI approved

History

Versions

15

First release

2019-09-26

Latest release

2026-04-28

Avg cadence

178 days

Cold removal rate

Dep drift

17

LOC over versions

v3.9: 1,931 LOCv3.10: 3,466 LOCv3.11: 3,466 LOCv3.12: 5,370 LOCv3.13: 5,370 LOCv3.14: 5,370 LOCv3.15: 5,370 LOCv3.16: 5,370 LOCv3.17: 5,370 LOCv3.18: 5,370 LOCv3.19: 6,135 LOCv3.20: 6,135 LOCv3.21: 6,135 LOCv3.22: 6,135 LOCv3.23: 6,135 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Documentation

Documentation
READMEYes · 121 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo
Examples that run
100%
Documented parameters
100%
Return-value docs
100%
References docs
41%

Topics

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