derfinderData
Bioc currentProcessed BigWigs from BrainSpan for examples
Release Lineage
Entered 3.0 · Oct 14, 2014
Current · Requires R 4.6
Description
Processed 22 samples from BrainSpan keeping only the information for chromosome 21. Data is stored in the BigWig format and is used for examples in other packages.
None published for Bioconductor
Call graph
Open call graph →Code intelligence has not been computed for this package yet.
Code
Structure
Lines of code
300
Files
37
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
0
Internal functions
0
Testing
Has tests
No
Test-to-code ratio
0.00
testthat edition
–
Docs
Roxygen coverage
–
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
–
Unsafe pattern score
0
Dep constraint coverage
–
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
3.1.1
System requirements
–
C++ standard
–
License
Artistic-2.0
License flags
SPDX valid, OSI approved
History
Versions
24
First release
2014-12-02
Latest release
2026-04-28
Avg cadence
182 days
Cold removal rate
–
Dep drift
0
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Help pages
- 2 (1 internal)includes a package overview page
- Examples that run
- no examples
- Exported functions with examples
- not tracked
- Documented parameters
- not tracked
- Return-value docs
- not tracked
- Help pages citing references
- 50%
Repository practices
12 development-tooling and community-health practices detected across 5 families in the upstream repository
Checks run against github.com/leekgroup/derfinderdata on 2026-10-18.
The R CMD check workflow runs on Linux, macOS and Windows, and on R-devel
GitHub Pages site last deployed 2026-03-31 · The repository has a site deploy workflow
Show all practicesHide 1 practice
Datasets
| Name | Class | Size | Also in |
|---|---|---|---|
| brainspanPheno | data.frame | 24 × 7 | No other package |
| fullCovA1C | list | 1 element | 2 packages |
| fullCovAMY | list | 1 element | 2 packages |
Topics
Suggested by (2)
People
- Leonardo Collado-Torres author maintainer
- Andrew Jaffe author
- Jeffrey Leek author thesis advisor
Cite
Cite this package
Run in R for the authors' preferred citation:
citation("derfinderData")This package has no citation file, so citation() returns this entry built from DESCRIPTION.
Cite the R Observatory
For a number measured here: a download total, a coverage figure, an archival date.
From data release v2026-10-22, which the citation names so these numbers can be found later. More on citing and the projects behind them.