cellmigRation
Bioc currentTrack Cells, Analyze Cell Trajectories and Compute Migration Statistics
Release Lineage
Entered 3.13 · May 20, 2021
Current · Requires R 4.6
Description
Import TIFF images of fluorescently labeled cells, and track cell movements over time. Parallelization is supported for image processing and for fast computation of cell trajectories. In-depth analysis of cell trajectories is enabled by 15 trajectory analysis functions.
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
105 47 exported
Complexity
7.8 avg / 34 max
Call network
105 nodes / 111 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
17,477
Files
159
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
47
Internal functions
58
Testing & CI
Has tests
Yes
Test-to-code ratio
0.00
testthat edition
–
CI present
Yes
CI type
["travis"]
PR gated
No
Docs
Roxygen coverage
100%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
50%
Unsafe pattern score
0
Dep constraint coverage
0%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
4.1
System requirements
–
C++ standard
–
License
GPL-2
License flags
SPDX valid, OSI approved
History
Versions
11
First release
2021-05-19
Latest release
2026-04-28
Avg cadence
182 days
Cold removal rate
–
Dep drift
0
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Examples that run
- 100%
- Documented parameters
- 100%
- Return-value docs
- 100%
- References docs
- 61%
Topics
People
- Waldir Leoncio maintainer author
- Damiano Fantini author cph
- Salim Ghannoum author cph
- Øystein Sørensen author