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altcdfenvs

Bioc current

alternative CDF environments (aka probeset mappings)

v2.74.0 · software · GPL (>= 2)

Release Lineage

Entered 1.4 · May 17, 2004

Current · Requires R 4.6

1.0 In 45 of 49 releases 3.23

Description

Convenience data structures and functions to handle cdfenvs

Test coverage

Line coverage

Expression

Tests / Examples

Functions

31 0 exported

Complexity

4.5 avg / 16 max

Call network

31 nodes / 17 edges

Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.

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Lowest coverage

Per-function coverage is not measured for this package yet.

Code

Structure

Lines of code

2,359

Files

40

Compiled share

0%

Has compiled src

No

Language breakdown

R 947 (40.1%)Docs 836 (35.4%)Vignettes 576 (24.4%)

API

Exported functions

29

Internal functions

0

Testing & CI

Has tests

No

Test-to-code ratio

0.00

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Roxygen coverage

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

Unsafe pattern score

0

Dep constraint coverage

37.5%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

2.7

System requirements

C++ standard

License

GPL (>= 2)

License flags

SPDX valid, OSI approved

History

Versions

45

First release

2004-08-23

Latest release

2026-04-28

Avg cadence

182 days

Cold removal rate

Dep drift

13

LOC over versions

v1.4: 870 LOCv1.5: 1,156 LOCv1.6: 1,327 LOCv1.7: 1,327 LOCv1.8: 1,327 LOCv1.9: 1,327 LOCv2.0: 1,327 LOCv2.1: 1,326 LOCv2.2: 1,802 LOCv2.3: 1,806 LOCv2.4: 1,806 LOCv2.5: 1,806 LOCv2.6: 1,806 LOCv2.7: 1,789 LOCv2.8: 1,789 LOCv2.9: 1,789 LOCv2.10: 1,784 LOCv2.11: 1,783 LOCv2.12: 1,783 LOCv2.13: 1,783 LOCv2.14: 2,359 LOCv3.0: 2,359 LOCv3.1: 2,359 LOCv3.2: 2,359 LOCv3.3: 2,359 LOCv3.4: 2,359 LOCv3.5: 2,359 LOCv3.6: 2,359 LOCv3.7: 2,359 LOCv3.8: 2,359 LOCv3.9: 2,359 LOCv3.10: 2,359 LOCv3.11: 2,359 LOCv3.12: 2,359 LOCv3.13: 2,359 LOCv3.14: 2,359 LOCv3.15: 2,359 LOCv3.16: 2,359 LOCv3.17: 2,359 LOCv3.18: 2,359 LOCv3.19: 2,359 LOCv3.20: 2,359 LOCv3.21: 2,359 LOCv3.22: 2,359 LOCv3.23: 2,359 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Topics

Depended on by (1)

Bioconductor (1)

People

Laurent Gautier

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