altcdfenvs
Bioc currentalternative CDF environments (aka probeset mappings)
Release Lineage
Entered 1.4 · May 17, 2004
Current · Requires R 4.6
Description
Convenience data structures and functions to handle cdfenvs
None published for Bioconductor
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
31 0 exported
Complexity
4.5 avg / 16 max
Call network
31 nodes / 17 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
2,359
Files
40
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
29
Internal functions
0
Testing
Has tests
No
Test-to-code ratio
0.00
testthat edition
–
Docs
Roxygen coverage
–
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
–
Unsafe pattern score
0
Dep constraint coverage
37.5%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
2.7
System requirements
–
C++ standard
–
License
GPL (>= 2)
License flags
SPDX valid, OSI approved
History
Versions
45
First release
2004-08-23
Latest release
2026-04-28
Avg cadence
182 days
Cold removal rate
–
Dep drift
13
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Help pages
- 19
- Examples that run
- 54%7 run in a plain check · 6 hold no code
- Exported functions with examples
- 63%
- Documented parameters
- not tracked
- Return-value docs
- not tracked
- Help pages citing references
- 16%
Repository practices
Checks read the Bioconductor git repository (git.bioconductor.org), branch RELEASE_3_23.
No development-tooling practices detected in the Bioconductor git repository.
Datasets
Topics
Depended on by (1)
Bioconductor (1)
People (from the free-text Author field)
Cite
Cite this package
Run in R for the authors' entry:
citation("altcdfenvs")The package provides a citation file, so citation() returns the authors' own entry.
Cite the R Observatory
For a number measured here: a download total, a coverage figure, an archival date.
From data release v2026-10-22, which the citation names so these numbers can be found later. More on citing and the projects behind them.