SemDist
Bioc currentInformation Accretion-based Function Predictor Evaluation
Release Lineage
Entered 3.0 · Oct 14, 2014
Current · Requires R 4.6
Description
This package implements methods to calculate information accretion for a given version of the gene ontology and uses this data to calculate remaining uncertainty, misinformation, and semantic similarity for given sets of predicted annotations and true annotations from a protein function predictor.
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
15 0 exported
Complexity
3.3 avg / 16 max
Call network
15 nodes / 18 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
1,808
Files
186
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
3
Internal functions
12
Testing & CI
Has tests
No
Test-to-code ratio
0.00
testthat edition
–
CI present
No
CI type
[]
PR gated
No
Docs
Roxygen coverage
–
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
–
Unsafe pattern score
0
Dep constraint coverage
0%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
3.1
System requirements
–
C++ standard
–
License
GPL (>= 2)
License flags
SPDX valid, OSI approved
History
Versions
24
First release
2014-10-13
Latest release
2026-04-28
Avg cadence
182 days
Cold removal rate
–
Dep drift
0
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Topics
People
Ian Gonzalez
Cite
Cite this package
Run in R for the authors' preferred citation:
citation("SemDist")Cite the R Observatory
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