Rhdf5lib
Bioc currenthdf5 library as an R package
Release Lineage
Entered 3.6 · Oct 31, 2017
Current · Requires R 4.6
Description
Provides C and C++ hdf5 libraries.
None published for Bioconductor
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
5 2 exported
Complexity
2.2 avg / 5 max
Call network
5 nodes / 3 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
339
Files
985
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
2
Internal functions
3
Recent export changes
Testing
Has tests
Yes
Test-to-code ratio
0.02
testthat edition
–
Docs
Roxygen coverage
100%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
0%
Unsafe pattern score
0
Dep constraint coverage
–
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
4.2.0
System requirements
–
C++ standard
–
License
Artistic-2.0
License flags
SPDX valid, OSI approved
History
Versions
18
First release
2017-10-30
Latest release
2026-04-28
Avg cadence
182 days
Cold removal rate
–
Dep drift
0
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Help pages
- 3includes a package overview page
- Examples that run
- 100%2 run in a plain check
- Exported functions with examples
- 100%
- Documented parameters
- 100%
- Return-value docs
- 100%
- Help pages citing references
- 0%
- Linking to Rhdf5lib HTML
Repository practices
3 development-tooling and community-health practices detected across 2 families in the upstream repository
Checks run against github.com/huber-group-embl/rhdf5lib on 2026-10-21.
The R CMD check workflow runs on Linux, macOS and Windows, and on R-devel
Topics
Depended on by (5)
CRAN (3)
Suggested by (1)
People
- Hugo Gruson maintainer
- The HDF Group copyright holder
- Mike Smith contributor
Cite
Cite this package
Run in R for the authors' preferred citation:
citation("Rhdf5lib")This package has no citation file, so citation() returns this entry built from DESCRIPTION.
Cite the R Observatory
For a number measured here: a download total, a coverage figure, an archival date.
From data release v2026-10-24, which the citation names so these numbers can be found later. More on citing and the projects behind them.