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Rbowtie

Bioc current

R bowtie wrapper

v1.52.0 · software · Artistic-2.0 | file LICENSE
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Release Lineage

Entered 2.9 · Nov 1, 2011

Current · Requires R 4.6

1.0 In 30 of 49 releases 3.23

Description

This package provides an R wrapper around the popular bowtie short read aligner and around SpliceMap, a de novo splice junction discovery and alignment tool. The package is used by the QuasR bioconductor package. We recommend to use the QuasR package instead of using Rbowtie directly.

Code & tests

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Code

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Topics

Software › Technology › Sequencing
Software › WorkflowStep › Alignment

Depended on by (7)

Bioconductor (7)

crisprBowtie crisprDesign eisaR multicrispr QuasR seqpac MACPET

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