RSeqAn
Bioc currentR SeqAn
Release Lineage
Entered 3.7 · May 1, 2018
Current · Requires R 4.6
Description
Headers and some wrapper functions from the SeqAn C++ library for ease of usage in R.
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
6 1 exported
Complexity
1 avg / 1 max
Call network
6 nodes / 2 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
260
Files
761
Compiled share
25.8%
Has compiled src
Yes
Language breakdown
API
Exported functions
1
Internal functions
0
Recent export changes
Testing & CI
Has tests
Yes
Test-to-code ratio
0.83
testthat edition
–
CI present
Yes
CI type
["travis"]
PR gated
No
Docs
Roxygen coverage
100%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
–
Unsafe pattern score
0
Dep constraint coverage
0%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
–
System requirements
–
C++ standard
C++14
License
BSD_3_clause + file LICENSE
License flags
SPDX valid, OSI approved
History
Versions
17
First release
2018-04-30
Latest release
2026-04-28
Avg cadence
182 days
Cold removal rate
100%
Dep drift
1
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Examples that run
- not tracked
- Documented parameters
- 100%
- Return-value docs
- 0%
- References docs
- 0%
Topics
Depended on by (1)
Bioconductor (1)
People
- August Guang author maintainer
Cite
Cite this package
Run in R for the authors' preferred citation:
citation("RSeqAn")This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.
Cite the R Observatory
For a number measured here: a download total, a coverage figure, an archival date.
From data release v2026-08-24, which the citation names so these numbers can be found later. More on citing and the projects behind them.