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NBAMSeq

Bioc current

Negative Binomial Additive Model for RNA-Seq Data

v1.28.0 · software · GPL-2
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Release Lineage

Entered 3.9 · May 3, 2019

Current · Requires R 4.6

1.0 In 15 of 49 releases 3.23

Description

High-throughput sequencing experiments followed by differential expression analysis is a widely used approach to detect genomic biomarkers. A fundamental step in differential expression analysis is to model the association between gene counts and covariates of interest. NBAMSeq a flexible statistical model based on the generalized additive model and allows for information sharing across genes in variance estimation.

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Topics

Software › Technology › Sequencing › RNASeq
Software › BiologicalQuestion › DifferentialExpression
Software › AssayDomain › GeneExpression
Software › Technology › Sequencing
Software › BiologicalQuestion › Coverage

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