MetaboCoreUtils
Bioc currentCore Utils for Metabolomics Data
Release Lineage
Entered 3.13 · May 20, 2021
Current · Requires R 4.6
Description
MetaboCoreUtils defines metabolomics-related core functionality provided as low-level functions to allow a data structure-independent usage across various R packages. This includes functions to calculate between ion (adduct) and compound mass-to-charge ratios and masses or functions to work with chemical formulas. The package provides also a set of adduct definitions and information on some commercially available internal standard mixes commonly used in MS experiments.
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
66 40 exported
Complexity
2.8 avg / 11 max
Call network
66 nodes / 50 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
6,269
Files
88
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
40
Internal functions
26
Recent export changes
Testing & CI
Has tests
Yes
Test-to-code ratio
0.53
testthat edition
–
CI present
Yes
CI type
["github-actions"]
PR gated
No
Docs
Roxygen coverage
100%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
0%
Unsafe pattern score
0
Dep constraint coverage
0%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
4.0
System requirements
–
C++ standard
–
License
Artistic-2.0
License flags
SPDX valid, OSI approved
History
Versions
11
First release
2021-05-19
Latest release
2026-04-30
Avg cadence
182 days
Cold removal rate
–
Dep drift
5
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Examples that run
- 100%
- Documented parameters
- 100%
- Return-value docs
- 100%
- References docs
- 10%
Topics
Depended on by (7)
Bioconductor (6)
CRAN (1)
People
- Johannes Rainer author maintainer
- Sebastian Gibb author
- Roger Gine author
- William Kumler author
- Philippine Louail author
- Liesa Salzer contributor
- Michael Stravs contributor
- Gabriele Tomè author
- Andrea Vicini author
- Michael Witting author
Cite
Cite this package
Run in R for the authors' preferred citation:
citation("MetaboCoreUtils")This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.
Cite the R Observatory
For a number measured here: a download total, a coverage figure, an archival date.
From data release v2026-08-22, which the citation names so these numbers can be found later. More on citing and the projects behind them.