M3D
Bioc removedIdentifies differentially methylated regions across testing groups
v1.22.0
·
Artistic License 2.0
Release Lineage
Entered 3.0 · Oct 14, 2014
Removed after 3.11 · Apr 28, 2020
1.0
In 12 of 49 releases
3.23
Description
This package identifies statistically significantly differentially methylated regions of CpGs. It uses kernel methods (the Maximum Mean Discrepancy) to measure differences in methylation profiles, and relates these to inter-replicate changes, whilst accounting for variation in coverage profiles.
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