CCPlotR
Bioc currentPlots For Visualising Cell-Cell Interactions
Release Lineage
Entered 3.18 · Oct 25, 2023
Current · Requires R 4.6
Description
CCPlotR is an R package for visualising results from tools that predict cell-cell interactions from single-cell RNA-seq data. These plots are generic and can be used to visualise results from multiple tools such as Liana, CellPhoneDB, NATMI etc.
None published for Bioconductor
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
8 8 exported
Complexity
4.1 avg / 12 max
Call network
8 nodes / 5 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
3,944
Files
44
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
9
Internal functions
0
Recent export changes
Testing
Has tests
Yes
Test-to-code ratio
0.08
testthat edition
3
Docs
Roxygen coverage
100%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
0%
Unsafe pattern score
3
Dep constraint coverage
0%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
–
System requirements
–
C++ standard
–
License
MIT + file LICENSE
License flags
SPDX valid, OSI approved
History
Versions
6
First release
2023-10-24
Latest release
2026-04-28
Avg cadence
182 days
Cold removal rate
–
Dep drift
1
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Help pages
- 11
- Examples that run
- 100%8 run in a plain check
- Exported functions with examples
- 89%
- Documented parameters
- 97%
- Return-value docs
- 89%
- Help pages citing references
- 0%
- User Guide HTML
Repository practices
Checks run against github.com/sarah145/ccplotr on 2026-10-18.
No development-tooling practices detected in the upstream repository.
Datasets
Topics
Suggested by (1)
People
- Sarah Ennis author maintainer
- Eva Szegezdi author
- Pilib Ó Broin author
Cite
Cite this package
Run in R for the authors' entry:
citation("CCPlotR")The package provides a citation file, so citation() returns the authors' own entry.
It points to 10.1093/bioadv/vbad130.
Cite the R Observatory
For a number measured here: a download total, a coverage figure, an archival date.
From data release v2026-10-20, which the citation names so these numbers can be found later. More on citing and the projects behind them.