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CCPROMISE

Bioc current

PROMISE analysis with Canonical Correlation for Two Forms of High Dimensional Genetic Data

v1.38.0 · software · GPL (>= 2)

Release Lineage

Entered 3.4 · Oct 18, 2016

Current · Requires R 4.6

1.0 In 20 of 49 releases 3.23

Description

Perform Canonical correlation between two forms of high demensional genetic data, and associate the first compoent of each form of data with a specific biologically interesting pattern of associations with multiple endpoints. A probe level analysis is also implemented.

Test coverage

Line coverage

Expression

Tests / Examples

Functions

6 5 exported

Complexity

11.2 avg / 24 max

Call network

6 nodes / 6 edges

Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.

Loading call graph…

Lowest coverage

Per-function coverage is not measured for this package yet.

Code

Structure

Lines of code

1,040

Files

23

Compiled share

0%

Has compiled src

No

Language breakdown

R 556 (53.5%)Docs 369 (35.5%)Vignettes 115 (11.1%)

API

Exported functions

5

Internal functions

1

Testing & CI

Has tests

No

Test-to-code ratio

0.00

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Roxygen coverage

100%

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

0%

Unsafe pattern score

0

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

3.3.0

System requirements

C++ standard

License

GPL (>= 2)

License flags

SPDX valid, OSI approved

History

Versions

20

First release

2016-10-17

Latest release

2026-04-28

Avg cadence

182 days

Cold removal rate

Dep drift

0

LOC over versions

v3.4: 1,040 LOCv3.5: 1,040 LOCv3.6: 1,040 LOCv3.7: 1,040 LOCv3.8: 1,040 LOCv3.9: 1,040 LOCv3.10: 1,040 LOCv3.11: 1,040 LOCv3.12: 1,040 LOCv3.13: 1,040 LOCv3.14: 1,040 LOCv3.15: 1,040 LOCv3.16: 1,040 LOCv3.17: 1,040 LOCv3.18: 1,040 LOCv3.19: 1,040 LOCv3.20: 1,040 LOCv3.21: 1,040 LOCv3.22: 1,040 LOCv3.23: 1,040 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Documentation

Documentation
READMENoVignettesYes · dynamicpkgdown siteNoNEWSNoCode of conductNoContributing guideNo
Examples that run
100%
Documented parameters
100%
Return-value docs
100%
References docs
30%

Topics

People

Xueyuan Cao

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("CCPROMISE")

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

APA

Balamuta, J. J. (2026). R Observatory: Metrics for CCPROMISE version 1.38.0 [Data set]. HJJB, LLC. Data release v2026-08-22. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-22, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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