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BrainSABER

Bioc removed

Brain Span Atlas in Biobase Expressionset R toolset

v1.8.0 · Artistic-2.0

Release Lineage

Entered 3.12 · Oct 28, 2020

Removed after 3.16 · Nov 2, 2022

1.0 In 5 of 49 releases 3.23

Description

The Allen Institute for Brain Science provides an RNA sequencing (RNA-Seq) data resource for studying transcriptional mechanisms involved in human brain development known as BrainSpan. BrainSABER is an R package that facilitates comparison of user data with the various developmental stages and brain structures found in the BrainSpan atlas by generating dynamic similarity heatmaps for the two data sets. It also provides a self-validating container for user data.

Advisories

None published for Bioconductor

Code intelligence has not been computed for this package yet.

Code

Code metrics have not been computed for this package yet.

Topics

Available on

CRANr2uBioconductorautoCRANCOPR

People

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("BrainSABER")
Biomedical Engineering, U., Minette, C., & Radichev, E. (2022). BrainSABER: Brain Span Atlas in Biobase Expressionset R toolset (Version 1.8.0) [Computer software]. https://bioconductor.org/packages/BrainSABER

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

APA

Balamuta, J. J. (2026). R Observatory: Metrics for BrainSABER version 1.8.0 [Data set]. HJJB, LLC. Data release v2026-10-18. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-18, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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