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BeadDataPackR

Bioc current

Compression of Illumina BeadArray data

v1.64.0 · software · GPL-2

Release Lineage

Entered 2.6 · Apr 23, 2010

Current · Requires R 4.6

1.0 In 33 of 49 releases 3.23

Description

Provides functionality for the compression and decompression of raw bead-level data from the Illumina BeadArray platform.

Test coverage

Line coverage

Expression

Tests / Examples

Functions

37 4 exported

Complexity

5.1 avg / 24 max

Call network

37 nodes / 37 edges

Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.

Loading call graph…

Lowest coverage

Per-function coverage is not measured for this package yet.

Code

Structure

Lines of code

1,607

Files

26

Compiled share

15.9%

Has compiled src

Yes

Language breakdown

R 1,015 (63.2%)C/C++/src 255 (15.9%)Docs 216 (13.4%)Vignettes 121 (7.5%)

API

Exported functions

4

Internal functions

23

Testing & CI

Has tests

No

Test-to-code ratio

0.00

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Roxygen coverage

100%

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

0%

Unsafe pattern score

0

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

System requirements

C++ standard

License

GPL-2

License flags

SPDX valid, OSI approved

History

Versions

33

First release

2010-08-05

Latest release

2026-04-28

Avg cadence

183 days

Cold removal rate

Dep drift

2

LOC over versions

v2.6: 1,169 LOCv2.7: 1,432 LOCv2.8: 1,461 LOCv2.9: 1,478 LOCv2.10: 1,480 LOCv2.11: 1,480 LOCv2.12: 1,480 LOCv2.13: 1,480 LOCv2.14: 1,600 LOCv3.0: 1,600 LOCv3.1: 1,601 LOCv3.2: 1,601 LOCv3.3: 1,601 LOCv3.4: 1,601 LOCv3.5: 1,601 LOCv3.6: 1,601 LOCv3.7: 1,607 LOCv3.8: 1,607 LOCv3.9: 1,607 LOCv3.10: 1,607 LOCv3.11: 1,607 LOCv3.12: 1,607 LOCv3.13: 1,607 LOCv3.14: 1,607 LOCv3.15: 1,607 LOCv3.16: 1,607 LOCv3.17: 1,607 LOCv3.18: 1,607 LOCv3.19: 1,607 LOCv3.20: 1,607 LOCv3.21: 1,607 LOCv3.22: 1,607 LOCv3.23: 1,607 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Documentation

Documentation
READMENoVignettesYes · dynamicpkgdown siteNoNEWSNoCode of conductNoContributing guideNo
Examples that run
100%
Documented parameters
100%
Return-value docs
100%
References docs
0%

Topics

Depended on by (1)

Bioconductor (1)

People

Mike Smith

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("BeadDataPackR")

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

APA

Balamuta, J. J. (2026). R Observatory: Metrics for BeadDataPackR version 1.64.0 [Data set]. HJJB, LLC. Data release v2026-08-23. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-23, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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